| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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Identifier: 94311471
GI number: 94311471
Start: 2759742
End: 2760716
Strand: Direct
Name: bug
Synonym: Rmet_2535
Alternate gene names: NA
Gene position: 2759742-2760716 (Clockwise)
Preceding gene: 94311469
Following gene: 94311472
Centisome position: 70.26
GC content: 63.79
Gene sequence:
>975_bases ATGATCCGCAAGAGATGGACGTGCATGCTGGCGCTGGCGCTGGTGCTGGTGAGCCAGTCGGCTTCGGCACAGCCCACCTA CCCGACCCGGCCGATCAGCTTCGTGCTGCCCTTTTCCGCAGGCGGCGCCGCTGACACTGTCTCTCGCATGCTTGCCGAGG AAATGAGCAAGCGCCTGGGCCAGCCGATCATCGTCGAGAACCGTCCGGGTGCCGCCGGCGTCATCGGCACAAACGTTGCA GCCAAGGCTCCGGCCGACGGCTACACCGTATTGCTGACACTGACGCAGGCGATCCTCACCAACCAGTTTCTGTTCACCAA GCTTCCCTACGATCCCCGCAAGGAACTGGCCTTCGTCACCGAGGTCTGCGGCGGTTCCGTCCTTCTTGTGGTCAATCCCC GCATACCAGCAAAGGACGTCAGCGAACTGCTCAACTGGGCCGCCAACAACCGCGCCTCATTCGGCTCGTGGGGTACGGGC TCCTACGGACACCTCACCAGTGCCTACCTGAACCGCTCACGCAAGATCGACCTCACCCATGTCGCCTACAAGGGCGAAGC ACCGATGATCCAGGACCTGGTGGGCGGGCAGATCGACATCGCCTTCGTTACCGCGTTCTCGGCCAAGCCCTTTATCGACT CGGGCAAGCTGCGTGTTCTGGCGGTGACGGGTGAGCGGCGCCTGCCCGCCCTGCCCAATGTGCCGACGCTGGCTGAAGCC GGGCTGACAGATCCGGAATTCCAGTCAACGGGCAAACTCATCATGATGGTGCCCGCCGGCACCCCCGCGCCAATCGTCGA ACGCATCGAGAGTGCGGCACGCGCCGTGATCGGCACCGAAGCGATCCGCAACCGCATGCGCGGCATCGGCATGGAGCCGA TCGGCAACAGCAGCAGGCAGGCGCTGGCCAATTATGAGGCGATGTATCCGGTGCATCAGCGGCTCGTTCAGTTGACCGGC GCGAAGCTGGACTGA
Upstream 100 bases:
>100_bases GGGAACCCGGGAATGAGCCATGGCCGCCCTGCCTTCCGGCCGGCCGAGCAACCCATGACAAGATGCGGCGGACACCAGCC GCGACAAGGAGACTGCAACG
Downstream 100 bases:
>100_bases CGCCTCTCCCGCGCTGCTGCTCGCCCGGGACCGTCCCGGGCCGCAAGACCACTTTCCCGTACTCCGCACCGACGCCACCC CGCCCCACCTCCCCAATGCG
Product: extra-cytoplasmic Solute Receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MIRKRWTCMLALALVLVSQSASAQPTYPTRPISFVLPFSAGGAADTVSRMLAEEMSKRLGQPIIVENRPGAAGVIGTNVA AKAPADGYTVLLTLTQAILTNQFLFTKLPYDPRKELAFVTEVCGGSVLLVVNPRIPAKDVSELLNWAANNRASFGSWGTG SYGHLTSAYLNRSRKIDLTHVAYKGEAPMIQDLVGGQIDIAFVTAFSAKPFIDSGKLRVLAVTGERRLPALPNVPTLAEA GLTDPEFQSTGKLIMMVPAGTPAPIVERIESAARAVIGTEAIRNRMRGIGMEPIGNSSRQALANYEAMYPVHQRLVQLTG AKLD
Sequences:
>Translated_324_residues MIRKRWTCMLALALVLVSQSASAQPTYPTRPISFVLPFSAGGAADTVSRMLAEEMSKRLGQPIIVENRPGAAGVIGTNVA AKAPADGYTVLLTLTQAILTNQFLFTKLPYDPRKELAFVTEVCGGSVLLVVNPRIPAKDVSELLNWAANNRASFGSWGTG SYGHLTSAYLNRSRKIDLTHVAYKGEAPMIQDLVGGQIDIAFVTAFSAKPFIDSGKLRVLAVTGERRLPALPNVPTLAEA GLTDPEFQSTGKLIMMVPAGTPAPIVERIESAARAVIGTEAIRNRMRGIGMEPIGNSSRQALANYEAMYPVHQRLVQLTG AKLD >Mature_324_residues MIRKRWTCMLALALVLVSQSASAQPTYPTRPISFVLPFSAGGAADTVSRMLAEEMSKRLGQPIIVENRPGAAGVIGTNVA AKAPADGYTVLLTLTQAILTNQFLFTKLPYDPRKELAFVTEVCGGSVLLVVNPRIPAKDVSELLNWAANNRASFGSWGTG SYGHLTSAYLNRSRKIDLTHVAYKGEAPMIQDLVGGQIDIAFVTAFSAKPFIDSGKLRVLAVTGERRLPALPNVPTLAEA GLTDPEFQSTGKLIMMVPAGTPAPIVERIESAARAVIGTEAIRNRMRGIGMEPIGNSSRQALANYEAMYPVHQRLVQLTG AKLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34760; Mature: 34760
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKRWTCMLALALVLVSQSASAQPTYPTRPISFVLPFSAGGAADTVSRMLAEEMSKRLG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC QPIIVENRPGAAGVIGTNVAAKAPADGYTVLLTLTQAILTNQFLFTKLPYDPRKELAFVT CCEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCHHHHHHHHH EVCGGSVLLVVNPRIPAKDVSELLNWAANNRASFGSWGTGSYGHLTSAYLNRSRKIDLTH HHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEE VAYKGEAPMIQDLVGGQIDIAFVTAFSAKPFIDSGKLRVLAVTGERRLPALPNVPTLAEA EEECCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHC GLTDPEFQSTGKLIMMVPAGTPAPIVERIESAARAVIGTEAIRNRMRGIGMEPIGNSSRQ CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ALANYEAMYPVHQRLVQLTGAKLD HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIRKRWTCMLALALVLVSQSASAQPTYPTRPISFVLPFSAGGAADTVSRMLAEEMSKRLG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC QPIIVENRPGAAGVIGTNVAAKAPADGYTVLLTLTQAILTNQFLFTKLPYDPRKELAFVT CCEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCHHHHHHHHH EVCGGSVLLVVNPRIPAKDVSELLNWAANNRASFGSWGTGSYGHLTSAYLNRSRKIDLTH HHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEE VAYKGEAPMIQDLVGGQIDIAFVTAFSAKPFIDSGKLRVLAVTGERRLPALPNVPTLAEA EEECCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHC GLTDPEFQSTGKLIMMVPAGTPAPIVERIESAARAVIGTEAIRNRMRGIGMEPIGNSSRQ CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ALANYEAMYPVHQRLVQLTGAKLD HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]