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The map label for this gene is nodJ [H]

Identifier: 94311394

GI number: 94311394

Start: 2668664

End: 2669521

Strand: Direct

Name: nodJ [H]

Synonym: Rmet_2458

Alternate gene names: 94311394

Gene position: 2668664-2669521 (Clockwise)

Preceding gene: 94311393

Following gene: 94311425

Centisome position: 67.94

GC content: 62.94

Gene sequence:

>858_bases
ATGAGCGAACTGGATCCACCACGAAGCACTGACGCGATCGTCGCCAGCGCGCCGCCTGTCGTGCAAACCCACCAGCGCTA
CCCTCAGCCGCTGCTGCCACGCAATGCGCGCAACTGGATGATGGTCTGGTACCGCAACTACATGGTCTGGAAGAAGCTGG
CCGTGCCGTCATTGATCGGCAACCTGGCGGATCCGATGATCTATCTGTTCGGCCTGGGTCTCGGGCTTGGATTGCTGGTC
GGCAATGTGCATGGCGTGTCGTATATCGCGTTTCTCGCGGCAGGCACAACTGCGTCGAGCGTGATGATGTCCGCTAGCTT
CGAGTCGATGTATTCGGCGTTCTCGCGCATGCATGTGCAGCGCACCTGGGAAGCAATCATGCACGCTCCACTGACGCTGG
GCGACGTGGTGCTGGGCGAGGTGCTATGGGCAGCCAGCAAGGCTGTGCTGTCCGGGGTGGCGATCATGCTGGTGGCCGGT
CTTCTGGGCTATGCGCAGTTTCCGAGCGCGCTCGGGGCGCTACCGGTCATCGTGCTGGCGGGTGTGACGTTCGCCAGTCT
GGCAATGATCGTGACCGCGCTGGCACCGAGCTACGACTTCTTCATGTTCTACCAGACGCTGGTCATGACGCCGATGCTGC
TGCTATCGGGCGTGTTCTTTCCGCTCGAACAGTTGCCGGAAGGCGCGCAGGCCGCCACGCAGGTGTTACCGCTGGCGCAC
GCGGTGGCATTGATTCGCCCGTTGATGTTGGGGCGGCCGGTGGAGAATGTCGCGCTGCACGTCGGTGTGCTCGCGGCGTA
TGCAGTCGTGGCGCTGACGGTGGCGCTGGTGCTGCTGAGGAAGAGGATGCTGCGGTGA

Upstream 100 bases:

>100_bases
GCCGCCCTGCATGGCAAGGGCGGCGTGCGCTACCTGCATCGGCCCGCCAACCTCGAGGACGTGTTCCTCAAGTTGACCGG
CCGCGAGATGAGGGATTGAA

Downstream 100 bases:

>100_bases
AGCCCCCCTCGCCCAGTCATGGGCAAGGGGAGAAAAACCAACCGCTTACTGGCCCAGGCCGCGCAGCAGATCGGCCTTGA
GATCCTCCACGGACTCCAGG

Product: Nodulation protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSELDPPRSTDAIVASAPPVVQTHQRYPQPLLPRNARNWMMVWYRNYMVWKKLAVPSLIGNLADPMIYLFGLGLGLGLLV
GNVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEVLWAASKAVLSGVAIMLVAG
LLGYAQFPSALGALPVIVLAGVTFASLAMIVTALAPSYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGAQAATQVLPLAH
AVALIRPLMLGRPVENVALHVGVLAAYAVVALTVALVLLRKRMLR

Sequences:

>Translated_285_residues
MSELDPPRSTDAIVASAPPVVQTHQRYPQPLLPRNARNWMMVWYRNYMVWKKLAVPSLIGNLADPMIYLFGLGLGLGLLV
GNVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEVLWAASKAVLSGVAIMLVAG
LLGYAQFPSALGALPVIVLAGVTFASLAMIVTALAPSYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGAQAATQVLPLAH
AVALIRPLMLGRPVENVALHVGVLAAYAVVALTVALVLLRKRMLR
>Mature_284_residues
SELDPPRSTDAIVASAPPVVQTHQRYPQPLLPRNARNWMMVWYRNYMVWKKLAVPSLIGNLADPMIYLFGLGLGLGLLVG
NVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEVLWAASKAVLSGVAIMLVAGL
LGYAQFPSALGALPVIVLAGVTFASLAMIVTALAPSYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGAQAATQVLPLAHA
VALIRPLMLGRPVENVALHVGVLAAYAVVALTVALVLLRKRMLR

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=245, Percent_Identity=24.0816326530612, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30708; Mature: 30577

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SELDPPRSTDAIVASAPPVVQTHQRYPQPLLPRNARNWMMVWYRNYMVWKKLAVPSLIG
CCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NLADPMIYLFGLGLGLGLLVGNVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RTWEAIMHAPLTLGDVVLGEVLWAASKAVLSGVAIMLVAGLLGYAQFPSALGALPVIVLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTFASLAMIVTALAPSYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGAQAATQVLPLAH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AVALIRPLMLGRPVENVALHVGVLAAYAVVALTVALVLLRKRMLR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]