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The map label for this gene is rsmI [H]

Identifier: 94311371

GI number: 94311371

Start: 2643824

End: 2644555

Strand: Direct

Name: rsmI [H]

Synonym: Rmet_2435

Alternate gene names: 94311371

Gene position: 2643824-2644555 (Clockwise)

Preceding gene: 94311370

Following gene: 94311376

Centisome position: 67.31

GC content: 66.26

Gene sequence:

>732_bases
ATGGCCGGTAACCTGTTCCTGATTCCCAACACACTGGGCAAGCGCGACGAATTCGACCCCGTGATGGACGTGATCCCAGC
GGGCGTCCAGCAGATCGCGGCGCGCCTCGACTACCTCGTCGCCGAGAACGCCAAGACCGCACGTGCATTCCTGAAAAAGC
TCAGCGAAACGACCCCGCTCGCGCAGCCGATCCAGCAGATCGAGATCCGCGAGTTGAACGTCAATACCCGCCCGGACACA
CTGACGGCCTTGCTTGACCCGATTGCCGCGGGCCGCGATGGCGGGCTGCTCTCCGAGGCTGGCGTACCGGCCGTGGCCGA
CCCCGGCGCGGACCTGGTGCGACTGGCGCATACGCGCGGCATCACCGTGCGCCCGCTGGTCGGGCCCAGCTCGATCCTGC
TCGCCGTGATGGGCTCGGGTCTGAACGGCCAGAGCTTCGCGTTCAACGGATACCTGCCCGTCGACGCCGATGTCCGCGCG
CAGAAGCTGCGCGAACTCGAACAGCGCTCCCGCAAGTCGCATCAGACGCAGGTGTGGATCGAAACGCCCTACCGCAACGG
TGCGCTGCTCGAGGCGCTGCGCCAACACTGCTCTGGTACCACGCTGCTGTCGATCGCAGTCGACCTGACGCTCCCAACCG
AAGCCATCGTCACGCTGCCGATTTCAGCATGGCGCCCTGACCGGCTCGACCTGCACAAGCGCCCCGCGATCTTCTCGCTG
CTGGCGCAGTAA

Upstream 100 bases:

>100_bases
CGTCGAATCCGACGATCCGACCGCGCTGATCGGCCTGCCGCTGATCGCACTCACCGGGATGCTGCGTCACGCCGGCTATC
CATGCTTCGGAGCCTGACCG

Downstream 100 bases:

>100_bases
GACAAAAACAAAAGCCCCCGGAAATCGGGGGCTTTTGCATGGGCGCATCGCGCCGATTACCGCACCGAAGGCACGGTTGC
ACTCATCATCATCAACTTCA

Product: putative methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAGNLFLIPNTLGKRDEFDPVMDVIPAGVQQIAARLDYLVAENAKTARAFLKKLSETTPLAQPIQQIEIRELNVNTRPDT
LTALLDPIAAGRDGGLLSEAGVPAVADPGADLVRLAHTRGITVRPLVGPSSILLAVMGSGLNGQSFAFNGYLPVDADVRA
QKLRELEQRSRKSHQTQVWIETPYRNGALLEALRQHCSGTTLLSIAVDLTLPTEAIVTLPISAWRPDRLDLHKRPAIFSL
LAQ

Sequences:

>Translated_243_residues
MAGNLFLIPNTLGKRDEFDPVMDVIPAGVQQIAARLDYLVAENAKTARAFLKKLSETTPLAQPIQQIEIRELNVNTRPDT
LTALLDPIAAGRDGGLLSEAGVPAVADPGADLVRLAHTRGITVRPLVGPSSILLAVMGSGLNGQSFAFNGYLPVDADVRA
QKLRELEQRSRKSHQTQVWIETPYRNGALLEALRQHCSGTTLLSIAVDLTLPTEAIVTLPISAWRPDRLDLHKRPAIFSL
LAQ
>Mature_242_residues
AGNLFLIPNTLGKRDEFDPVMDVIPAGVQQIAARLDYLVAENAKTARAFLKKLSETTPLAQPIQQIEIRELNVNTRPDTL
TALLDPIAAGRDGGLLSEAGVPAVADPGADLVRLAHTRGITVRPLVGPSSILLAVMGSGLNGQSFAFNGYLPVDADVRAQ
KLRELEQRSRKSHQTQVWIETPYRNGALLEALRQHCSGTTLLSIAVDLTLPTEAIVTLPISAWRPDRLDLHKRPAIFSLL
AQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=225, Percent_Identity=26.2222222222222, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26347; Mature: 26216

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNLFLIPNTLGKRDEFDPVMDVIPAGVQQIAARLDYLVAENAKTARAFLKKLSETTPL
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
AQPIQQIEIRELNVNTRPDTLTALLDPIAAGRDGGLLSEAGVPAVADPGADLVRLAHTRG
HHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
ITVRPLVGPSSILLAVMGSGLNGQSFAFNGYLPVDADVRAQKLRELEQRSRKSHQTQVWI
CEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ETPYRNGALLEALRQHCSGTTLLSIAVDLTLPTEAIVTLPISAWRPDRLDLHKRPAIFSL
ECCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
LAQ
HCC
>Mature Secondary Structure 
AGNLFLIPNTLGKRDEFDPVMDVIPAGVQQIAARLDYLVAENAKTARAFLKKLSETTPL
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
AQPIQQIEIRELNVNTRPDTLTALLDPIAAGRDGGLLSEAGVPAVADPGADLVRLAHTRG
HHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
ITVRPLVGPSSILLAVMGSGLNGQSFAFNGYLPVDADVRAQKLRELEQRSRKSHQTQVWI
CEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ETPYRNGALLEALRQHCSGTTLLSIAVDLTLPTEAIVTLPISAWRPDRLDLHKRPAIFSL
ECCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
LAQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]