Click here to switch to the map view.

The map label for this gene is 94311288

Identifier: 94311288

GI number: 94311288

Start: 2563790

End: 2564230

Strand: Direct

Name: 94311288

Synonym: Rmet_2352

Alternate gene names: NA

Gene position: 2563790-2564230 (Clockwise)

Preceding gene: 94311287

Following gene: 94311289

Centisome position: 65.27

GC content: 68.93

Gene sequence:

>441_bases
ATGCTCTCGAACTCGATTAAGGGCCTGGTGCTGGCCCTCGCCGTCGCGGTGCTCGGCGGCTGCGCCACCAGCAAGGAAAA
GCTGCTGACCCACGGTGACCGCACGATGATGGACATCTGGCAGCAGGAGGCCGGCGACGGCGGTGGCGCAGCCGGACGGA
ACGCCGGCCGCCAGCTGCTCGATGCGCGCCAGAGCCTGCGTCGGCCCCTGACCGACGCCGACGTGCAGGCCGCACCTGTC
GAGCAGATGCGCTACACGCGCACCGCGCGCAATGAGGTCCACCGCCAGTTCCAGCGCCTGCCCAATCCCGATCTCGTGAT
GTACGTGTACCCGCATCTGGCCGGCACCGATCCCGTGCCGGTGCCCGGCTACACGACCGTCTTCCCGCTCTACCAGCGCA
TCCAGTACGCGATGCCGGGCGAGCGCGTGGAGGACTACTGA

Upstream 100 bases:

>100_bases
GTGCAGCCCGGCGCCAAGGTCGCCGTCCACCTCGAAAAACCGCTCGCCATCGACTTCGATCCCGAAGGCCGCAAGGTCGA
TCACCGCGCAGGAGAAAGCC

Downstream 100 bases:

>100_bases
TGCGGTGGAAACTCCCATGGCCGAAGCTGGCCGGCGCCGGCTCCAGTAGCCCGGCTAGCGATGAGCAGCCGGACAGCTGG
CAGCGCCACGTCGAGGCCTT

Product: putative secreted protein

Products: NA

Alternate protein names: Secreted Protein; Signal Peptide; Signal Recognition Particle GTPase

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLSNSIKGLVLALAVAVLGGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGRQLLDARQSLRRPLTDADVQAAPV
EQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVPVPGYTTVFPLYQRIQYAMPGERVEDY

Sequences:

>Translated_146_residues
MLSNSIKGLVLALAVAVLGGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGRQLLDARQSLRRPLTDADVQAAPV
EQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVPVPGYTTVFPLYQRIQYAMPGERVEDY
>Mature_146_residues
MLSNSIKGLVLALAVAVLGGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGRQLLDARQSLRRPLTDADVQAAPV
EQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVPVPGYTTVFPLYQRIQYAMPGERVEDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16170; Mature: 16170

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNSIKGLVLALAVAVLGGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGRQLL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
DARQSLRRPLTDADVQAAPVEQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VPGYTTVFPLYQRIQYAMPGERVEDY
CCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLSNSIKGLVLALAVAVLGGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGRQLL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
DARQSLRRPLTDADVQAAPVEQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VPGYTTVFPLYQRIQYAMPGERVEDY
CCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA