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The map label for this gene is 94311270

Identifier: 94311270

GI number: 94311270

Start: 2547846

End: 2548436

Strand: Direct

Name: 94311270

Synonym: Rmet_2334

Alternate gene names: NA

Gene position: 2547846-2548436 (Clockwise)

Preceding gene: 94311269

Following gene: 94311271

Centisome position: 64.86

GC content: 73.1

Gene sequence:

>591_bases
ATGGCAGCGCCAGCCGTAGCCATGCCCCTGCGCGCACTGGTGCTCACTGCCGGCCTGTATGCCGTTGCCGCCCTGGCCCA
GGAGGTTCCGCCACCGGCTTACCAGCTTGCCGCCCAGCGCGCAGGCATCCCCTCGACCGTGCTCTACGCCGTGGCCTTGC
AGGAGAGCGGCATCCGGCGCAACGGGCGCCTGGTGCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAGTCGCGCCGCTTC
GCCACGCGCGCCGACGCCTGCGCTGGCCTGCAGCAGGCGATGCGCGCCACGCCGCACACGCGCATTGATGCGGGCCTGGG
CCAGATCAACCTCGGCTACCACAAGCACCGCTTTACCGGCGCGTGCGACCTGCTGGATCCGTATCGCAACCTGGCCGTTG
CCGCCGAGATCCTGAAGGAGCAGCACACCCCCGGCGAGGACTGGCTGCTGGCGATCGGCCGCTACCACCGCCCCGCAGGC
GGCGAGCCCGCCGCCCGCTATCGGCGCAGCGTGTCGCGCCACCTTGCCCGCGTGCAGGGCACGCGACCAGCCGCCGCGGT
CCTCGCGGCGCGCCAGGAGACCTCCCCATGA

Upstream 100 bases:

>100_bases
TGCGCGCCGGCAGCATCACGCTCAACCACGACGGCGGCCGCTGGCTGTCACTGGGCCTGCCCGGCGATCTGCCCGCCGCC
GTGCGCGAAGTGAACGGCCA

Downstream 100 bases:

>100_bases
CGAAACCCCATCCCGCCCATCTCGCGTTCACGGGCCTACTCATGCTGCTGTCAGGCCTGCCGCTGGCCTCGCGTGCCGGC
GAGCCACTGATCGTTGTCGA

Product: putative lytic transglycosylase, catalytic

Products: NA

Alternate protein names: Transglycosylase Slt Family; Transglycosylase SLT Domain-Containing Protein; Signal Peptide; Lytic Transglycosylase; Transglycosylase; Phage Transglycosylase; Slt Family Transglycosylase; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing; Type IV Secretory Pathway Lytic Transglycosylase; Lytic Murein Transglycosylase Family Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRLVPWPWSLNVAGQSRRF
ATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTGACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAG
GEPAARYRRSVSRHLARVQGTRPAAAVLAARQETSP

Sequences:

>Translated_196_residues
MAAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRLVPWPWSLNVAGQSRRF
ATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTGACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAG
GEPAARYRRSVSRHLARVQGTRPAAAVLAARQETSP
>Mature_195_residues
AAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRLVPWPWSLNVAGQSRRFA
TRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTGACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAGG
EPAARYRRSVSRHLARVQGTRPAAAVLAARQETSP

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21095; Mature: 20964

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NGRLVPWPWSLNVAGQSRRFATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTG
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEECCCHHHHCCC
ACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAGGEPAARYRRSVSRHLARVQG
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
TRPAAAVLAARQETSP
CCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NGRLVPWPWSLNVAGQSRRFATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTG
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEECCCHHHHCCC
ACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAGGEPAARYRRSVSRHLARVQG
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
TRPAAAVLAARQETSP
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA