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The map label for this gene is yubP [H]

Identifier: 94311257

GI number: 94311257

Start: 2537819

End: 2538646

Strand: Direct

Name: yubP [H]

Synonym: Rmet_2321

Alternate gene names: 94311257

Gene position: 2537819-2538646 (Clockwise)

Preceding gene: 94311256

Following gene: 94311258

Centisome position: 64.61

GC content: 63.41

Gene sequence:

>828_bases
ATGTCTCTGGTATCCCGCTTTGCTCCGCAATCCCCGATCCTGCGCTCTGATCGCCCACTCTCGGACGACCGCATTCGTGC
CGTCGTTCCGTCGATCTTCGCCGACGCTCCACATGGGAGCCGGTCCGATCGGTATGCCTACATACCGACCTCGACCGTGC
TGACCAAGCTGCGCCAGGAGGGCTTCGAGCCCTTCATGGTGTGTCAGACGCGCGTGCGCAACGAAGACCGGCGCGAGTAC
ACGAAGCACCTCATCCGACTTCGCCATGCAAGCCAGATCAACGGCGACGAGGCGAACGAGATCATCCTGCTCAACAGCCA
TGACGGCACGAGCAGCTATCAGATGCTCGCCGGCATGTTCCGGTTCGTCTGCCACAACGGCCTGGTTTGCGGTGACACCA
CCGCAGACATCCGCGTTCCCCACAAGGGCGACGTGGCCAGCCAGGTGATCGAAGGTGCCTACGGAGTCCTCGAAGGTTTC
GAGCGCGTGCATAACGCGCGCGATGCGATGCGCACCATCACCCTCGATGAGGGCGAAGCGGAGGTCTTTGCGAACTCTGC
GCTCGCACTCAAGTACGACGATCCGGCCAAGTCCACGCCTGTCACCGAGAGCCAACTGCTGGCCCCTCGGCGATGGGACG
ACCGCAAGAACGACCTGTGGGCCGTCTTCAACCGCGTCCAGGAGAACCTAGTCAAAGGGGGCCTGAACGGACGCACGGCC
AACGGCCGCAATCAGCGCACCCGTCCGGTGCAAGGCATCGACCAGAACCTGCGCCTGAACCGGGCGTTGTGGCTGCTGGC
CGAAGGCATGCGCCAGCTCAAGGCGTGA

Upstream 100 bases:

>100_bases
TACGCCGCGTCCCCAGGACGCGTGCTTGCGCATTTCATCCCCCGAGTTCCGCGTGGTCTCACGGCCACGCGGTTGTCGAA
TTTCTCAAAGGAGATCAGCC

Downstream 100 bases:

>100_bases
TGCCACGCGGACCTCGCCCACCTCGGGCGAGGCCATTTCCTCTCATCCACCGGGTGCCGTCGGCGGCCCGTCATTCATCA
TCAGGAGAACCATCATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQEGFEPFMVCQTRVRNEDRREY
TKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGF
ERVHNARDAMRTITLDEGEAEVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTA
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA

Sequences:

>Translated_275_residues
MSLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQEGFEPFMVCQTRVRNEDRREY
TKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGF
ERVHNARDAMRTITLDEGEAEVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTA
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA
>Mature_274_residues
SLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQEGFEPFMVCQTRVRNEDRREYT
KHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGFE
RVHNARDAMRTITLDEGEAEVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTAN
GRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=268, Percent_Identity=56.3432835820896, Blast_Score=319, Evalue=1e-88,
Organism=Escherichia coli, GI87081705, Length=268, Percent_Identity=55.5970149253731, Blast_Score=308, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 30998; Mature: 30867

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQE
CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHH
GFEPFMVCQTRVRNEDRREYTKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGFERVHNARDAMRTITLDEGEA
HHHHHCCEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
EVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTA
HHEECCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQE
CCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHH
GFEPFMVCQTRVRNEDRREYTKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGFERVHNARDAMRTITLDEGEA
HHHHHCCEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
EVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTA
HHEECCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]