| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311100
Identifier: 94311100
GI number: 94311100
Start: 2361754
End: 2363073
Strand: Reverse
Name: 94311100
Synonym: Rmet_2162
Alternate gene names: NA
Gene position: 2363073-2361754 (Counterclockwise)
Preceding gene: 94311107
Following gene: 94311099
Centisome position: 60.16
GC content: 55.53
Gene sequence:
>1320_bases ATGAGCGAGAAGAAGCTGACCGACAGCCAATTGTTGGGCACCCAGGGAACGGGCCTGATTGAACTAACGGTCTCTCGGAT GGGACTGGTCTGGAGACCGACGGCGCAACACGACGCCGGCATCGACGGCGAAATCGAAATTCGCGACGCGGCCAATGGTC GGATGACTGGCATGCTGCTCAAGGTACAGAGCAAAGCGGTCTCGGAGTTCAAGAATGAGACTAATGCCGGCTTCGACTAT TGGCCGGATTCCAGGGATATGGACTACTGGCTCGGACATAGTGTCCCCGTAATCCTCATCGTTTCGAGACCAAGTACAAA CGAGTGCTACTGGCAAGTCATCAAGCCTCCCACGGAAGGGGGCGAGAAGCGGCTTCGATTCGTTAAAGCCAGAGATGTTC TAAACGAAAGCAGCAAGGCCAGACTCATTGAGGTCGCCCAGGCGGCTTCACCCCGTGGCGTTGCGCCTGCGCTGGTAAGG CGCGAAACGCTTGTCAGCAACCTACTGCCGGTCACGAAGCTGCCGGAGCGACTTTACCTGGCGGAAACTCCTTATCGGAC GGCCAAGGACCTCGGTGCGGCATTACGTGAGGCCAATCTGCGGCTCGAGTTCATTCTGAAGAACGAACGAATACTTACGG TTCGCGACCTAACTGAGCCGCGCTATCACAACTTGTGCGACCGAGGCACCGTGGAAGACTTCGGTATCAAGGAGTGGGCC GCATCACCTGACCCTGACAGACAGCGCGACTTTGTGAGCCTCATGAACAGCTGTCTGCGAGAGAAGCTGCGGTCAATGCC CGAGGCACTTCGCTTTGACAAAGCTATGAGATGCTTCTTCTTCCCGCCGTCTGAAAGCAACACGCCGTATGACTATGCCT ATCGTGGGGACAAGAAGTCGACAGCGCGAGAGGTATTCAAAGAGCTTCGCAACAAGCAGAAGAAGCACTTGATGGGCTAT AGGCATTCAGCAATGAAGGCCCAGTTCTACCGGTTCGGCAGCGACTGGTATCTCGAGGTTACGCCGACATACTTCTTCAC CAGGAACGGTACTGAGCAAAGCAAATGGCATGAAGACTGGCTCAAGGGCATCAAGGAACTCGAGAAAAATGGCGCGATTC GCGGGCAGTTGATGATGTGGGCCGACCTGCTGCGCAATCCTCCAGGCCTGTTTGACGAGGGCTATCCGTTTCTCGACTTC GGTGTTCCGGTCACGTTTGGTATCGACCGAGGTATCGATGACAGCGCATGGGCCTCATCGGATAATATAGACAAACAGCA AGGCGAGACCTCCTCTGCACCACTGTTTGAGCTCGGATGA
Upstream 100 bases:
>100_bases AGCATTTACAATGGTCGATGTCTCAAGTCCATGTATCGAAAGTCCGCACCTCGTCTCTGGCTAGCCGGACAACCTCAGAA GCAGGTCTATTGGATAAGAA
Downstream 100 bases:
>100_bases TGAAACTTGACTTTCTGAAAGAGCCAGAGCTGGAGTTTGGCGGACATCACAGGCATGTCGATATGCGCCAAGGAATCGCT CTGTTCGGCCCGCTCGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSEKKLTDSQLLGTQGTGLIELTVSRMGLVWRPTAQHDAGIDGEIEIRDAANGRMTGMLLKVQSKAVSEFKNETNAGFDY WPDSRDMDYWLGHSVPVILIVSRPSTNECYWQVIKPPTEGGEKRLRFVKARDVLNESSKARLIEVAQAASPRGVAPALVR RETLVSNLLPVTKLPERLYLAETPYRTAKDLGAALREANLRLEFILKNERILTVRDLTEPRYHNLCDRGTVEDFGIKEWA ASPDPDRQRDFVSLMNSCLREKLRSMPEALRFDKAMRCFFFPPSESNTPYDYAYRGDKKSTAREVFKELRNKQKKHLMGY RHSAMKAQFYRFGSDWYLEVTPTYFFTRNGTEQSKWHEDWLKGIKELEKNGAIRGQLMMWADLLRNPPGLFDEGYPFLDF GVPVTFGIDRGIDDSAWASSDNIDKQQGETSSAPLFELG
Sequences:
>Translated_439_residues MSEKKLTDSQLLGTQGTGLIELTVSRMGLVWRPTAQHDAGIDGEIEIRDAANGRMTGMLLKVQSKAVSEFKNETNAGFDY WPDSRDMDYWLGHSVPVILIVSRPSTNECYWQVIKPPTEGGEKRLRFVKARDVLNESSKARLIEVAQAASPRGVAPALVR RETLVSNLLPVTKLPERLYLAETPYRTAKDLGAALREANLRLEFILKNERILTVRDLTEPRYHNLCDRGTVEDFGIKEWA ASPDPDRQRDFVSLMNSCLREKLRSMPEALRFDKAMRCFFFPPSESNTPYDYAYRGDKKSTAREVFKELRNKQKKHLMGY RHSAMKAQFYRFGSDWYLEVTPTYFFTRNGTEQSKWHEDWLKGIKELEKNGAIRGQLMMWADLLRNPPGLFDEGYPFLDF GVPVTFGIDRGIDDSAWASSDNIDKQQGETSSAPLFELG >Mature_438_residues SEKKLTDSQLLGTQGTGLIELTVSRMGLVWRPTAQHDAGIDGEIEIRDAANGRMTGMLLKVQSKAVSEFKNETNAGFDYW PDSRDMDYWLGHSVPVILIVSRPSTNECYWQVIKPPTEGGEKRLRFVKARDVLNESSKARLIEVAQAASPRGVAPALVRR ETLVSNLLPVTKLPERLYLAETPYRTAKDLGAALREANLRLEFILKNERILTVRDLTEPRYHNLCDRGTVEDFGIKEWAA SPDPDRQRDFVSLMNSCLREKLRSMPEALRFDKAMRCFFFPPSESNTPYDYAYRGDKKSTAREVFKELRNKQKKHLMGYR HSAMKAQFYRFGSDWYLEVTPTYFFTRNGTEQSKWHEDWLKGIKELEKNGAIRGQLMMWADLLRNPPGLFDEGYPFLDFG VPVTFGIDRGIDDSAWASSDNIDKQQGETSSAPLFELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50173; Mature: 50041
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00268 CECROPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKKLTDSQLLGTQGTGLIELTVSRMGLVWRPTAQHDAGIDGEIEIRDAANGRMTGMLL CCCCCCCHHHHCCCCCCCEEEEEEHHCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEE KVQSKAVSEFKNETNAGFDYWPDSRDMDYWLGHSVPVILIVSRPSTNECYWQVIKPPTEG EHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCC GEKRLRFVKARDVLNESSKARLIEVAQAASPRGVAPALVRRETLVSNLLPVTKLPERLYL CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHEE AETPYRTAKDLGAALREANLRLEFILKNERILTVRDLTEPRYHNLCDRGTVEDFGIKEWA ECCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCHHHC ASPDPDRQRDFVSLMNSCLREKLRSMPEALRFDKAMRCFFFPPSESNTPYDYAYRGDKKS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCHH TAREVFKELRNKQKKHLMGYRHSAMKAQFYRFGSDWYLEVTPTYFFTRNGTEQSKWHEDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCHHHHHHHH LKGIKELEKNGAIRGQLMMWADLLRNPPGLFDEGYPFLDFGVPVTFGIDRGIDDSAWASS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHCCCC DNIDKQQGETSSAPLFELG CCCCHHCCCCCCCCCEECC >Mature Secondary Structure SEKKLTDSQLLGTQGTGLIELTVSRMGLVWRPTAQHDAGIDGEIEIRDAANGRMTGMLL CCCCCCHHHHCCCCCCCEEEEEEHHCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEE KVQSKAVSEFKNETNAGFDYWPDSRDMDYWLGHSVPVILIVSRPSTNECYWQVIKPPTEG EHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCC GEKRLRFVKARDVLNESSKARLIEVAQAASPRGVAPALVRRETLVSNLLPVTKLPERLYL CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHEE AETPYRTAKDLGAALREANLRLEFILKNERILTVRDLTEPRYHNLCDRGTVEDFGIKEWA ECCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCHHHC ASPDPDRQRDFVSLMNSCLREKLRSMPEALRFDKAMRCFFFPPSESNTPYDYAYRGDKKS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCHH TAREVFKELRNKQKKHLMGYRHSAMKAQFYRFGSDWYLEVTPTYFFTRNGTEQSKWHEDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCHHHHHHHH LKGIKELEKNGAIRGQLMMWADLLRNPPGLFDEGYPFLDFGVPVTFGIDRGIDDSAWASS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHCCCC DNIDKQQGETSSAPLFELG CCCCHHCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA