Click here to switch to the map view.

The map label for this gene is 94311097

Identifier: 94311097

GI number: 94311097

Start: 2358807

End: 2359403

Strand: Direct

Name: 94311097

Synonym: Rmet_2159

Alternate gene names: NA

Gene position: 2358807-2359403 (Clockwise)

Preceding gene: 335055583

Following gene: 94311098

Centisome position: 60.05

GC content: 56.78

Gene sequence:

>597_bases
ATGCCTTTCCTCGGTTGCCGTCATCTCCATCACTTTGCCTGGACGCCAGCCAGCAGGCGTGGATGGATTCGAGCACGTAC
TACGAGTGAGCTTCGCAGACGTCAACTTGCTCACCCCGACGCTCTCTCACAGGGATACGAACTCCCACGCCCCGAGTTCG
CTAGAACTGAATGGAGTGGAGCGGCGGATTTGTCCATGGGTCGCTGGAGCCCTGTACAAGTGATGACACGCAGCCACCTT
ACACTAGACGAAATGGAGGCTGAGATAGGAGGCTATCTAAGGACCTACCGCATCCATCGCAACATCGACCAGGCTACCCT
CTCAATGCGAGCTGGCATCAGCGTGCGGGCTCTACGGAATCTCGAGACAGGCAACGGTTCGTCATTGCGCACCCTCTGCA
CGGTGCTTAGAGCCTTGGGCCGCGAAGGATGGCTCGACATGATTGCGCCTGTTCCCACCATCAACCCGTTGATGCTTACA
AGGCAAGCAAAGCCACGACAGCGGGCAAGCAAGCCCAGGAAAAAGAAGACCACATTCAAGGAGGCTTTGGCGGCGATACC
AAACGTCGGTGAAGATGACTCCGACTCACGGAAATAG

Upstream 100 bases:

>100_bases
CCAAGCGGCTTTCGGGAGCTGTAGCTGCGCTCTACCGGCAACCAGACGATGACCTCCGCCAGGTGTACGGCCAGTTGCTA
ACGGAGGCGGAAAGGCTCCC

Downstream 100 bases:

>100_bases
TCAGAGGAAGTGAAACCCGATTTCCAAATTGCCGTTGGGGACCGACCGGTCCTTCTTGCTTCTGTGAGGGCCGATTCACG
CACGTACACGTGTCCGCGGG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPFLGCRHLHHFAWTPASRRGWIRARTTSELRRRQLAHPDALSQGYELPRPEFARTEWSGAADLSMGRWSPVQVMTRSHL
TLDEMEAEIGGYLRTYRIHRNIDQATLSMRAGISVRALRNLETGNGSSLRTLCTVLRALGREGWLDMIAPVPTINPLMLT
RQAKPRQRASKPRKKKTTFKEALAAIPNVGEDDSDSRK

Sequences:

>Translated_198_residues
MPFLGCRHLHHFAWTPASRRGWIRARTTSELRRRQLAHPDALSQGYELPRPEFARTEWSGAADLSMGRWSPVQVMTRSHL
TLDEMEAEIGGYLRTYRIHRNIDQATLSMRAGISVRALRNLETGNGSSLRTLCTVLRALGREGWLDMIAPVPTINPLMLT
RQAKPRQRASKPRKKKTTFKEALAAIPNVGEDDSDSRK
>Mature_197_residues
PFLGCRHLHHFAWTPASRRGWIRARTTSELRRRQLAHPDALSQGYELPRPEFARTEWSGAADLSMGRWSPVQVMTRSHLT
LDEMEAEIGGYLRTYRIHRNIDQATLSMRAGISVRALRNLETGNGSSLRTLCTVLRALGREGWLDMIAPVPTINPLMLTR
QAKPRQRASKPRKKKTTFKEALAAIPNVGEDDSDSRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22483; Mature: 22352

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLGCRHLHHFAWTPASRRGWIRARTTSELRRRQLAHPDALSQGYELPRPEFARTEWSG
CCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
AADLSMGRWSPVQVMTRSHLTLDEMEAEIGGYLRTYRIHRNIDQATLSMRAGISVRALRN
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHC
LETGNGSSLRTLCTVLRALGREGWLDMIAPVPTINPLMLTRQAKPRQRASKPRKKKTTFK
CCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHEECCCCHHHHHCCCHHHHHHHH
EALAAIPNVGEDDSDSRK
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PFLGCRHLHHFAWTPASRRGWIRARTTSELRRRQLAHPDALSQGYELPRPEFARTEWSG
CCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
AADLSMGRWSPVQVMTRSHLTLDEMEAEIGGYLRTYRIHRNIDQATLSMRAGISVRALRN
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHC
LETGNGSSLRTLCTVLRALGREGWLDMIAPVPTINPLMLTRQAKPRQRASKPRKKKTTFK
CCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHEECCCCHHHHHCCCHHHHHHHH
EALAAIPNVGEDDSDSRK
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA