| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is ssuC [H]
Identifier: 94311058
GI number: 94311058
Start: 2301789
End: 2302580
Strand: Reverse
Name: ssuC [H]
Synonym: Rmet_2120
Alternate gene names: 94311058
Gene position: 2302580-2301789 (Counterclockwise)
Preceding gene: 94311059
Following gene: 94311056
Centisome position: 58.62
GC content: 61.87
Gene sequence:
>792_bases ATGGCTTTTCGTCCCGACTCAAAAGGTATGCTGCGCGTCTGGCAGCTTCTGCTTCTTGCGGTGGTACTGATCGTGTGGCA CATGGCCACGCGTTCCCAGCAAGTGGCGTTCTTCTTTGGTGAACCGCTGATTGTGGCGCAGCGCATCTGGAGCTGGTTCA TCGTCGAGCGTGATATCTACCTGCACCTGGGCGTCACGCTGCTCGAAACGGTGCTGGCATTCGGCATTGGTACCGTGTCC GGGCTGGGCGTGGGCCTGTGGCTGGCGCTGAGCCCGTTCACTTCGGCGGTGCTCGATCCCTACGTCAAGGCTGCCAACTC GATGCCACGCGTGATCCTGGCGCCGATTTTCGCGGTCTGGTTCGGTCTCGGCATCTGGTCGAAGGTGGCGCTGGCGGTGA CGTTGGTGTTCTTCATCGTCTTTTTCAACGTCTATCAGGGTGTCAAGGAAGTGAGCCCGGTGGTATTGGCCAACGCGCGC ATGCTCGGCGCCAACAAGCGGCAACTGCTGCGCCATGTCTATCTGCCGAGTGCCACGAGTTGGGTGTTCTCCTCGCTGCA TACCTCGGTGGGCCTGGCGTTTGTCGGGGCGGTGGTGGGCGAATACCTGGGGTCGGCGCGTGGCGTTGGCTACCTGATCC TGCAGGCTGAAGGCACCTTCGACATCAACACGGTGTTCGCGGGCATCGTGGTGCTGACCGCGTTCGCGCTGGTGCTCGAC TGGATGGTGACGGTGGGAGAGAAGCGCCTGATGCGGTGGCAGCCGAAGTCGGGGGAGACGGAGAAGCTCTGA
Upstream 100 bases:
>100_bases GCACGCCGCCATCTGGGACGTGCTGCGCGAAGAAGTGCTCAAGGGCTACGCGCAGCAGCGCAAGGCGGCCTGAGTTTTCC CGATCGGACAACAATCGAAC
Downstream 100 bases:
>100_bases CGCTTGAAGCTGCGGTCTGATTTCGCCCCTCTCCCGCTCGCGGGAGAGGGGGCAAACAAAAGTCCGACTCAAGGCGTGAT GACGATCTTCCCGGTCACCT
Product: TauT family ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAFRPDSKGMLRVWQLLLLAVVLIVWHMATRSQQVAFFFGEPLIVAQRIWSWFIVERDIYLHLGVTLLETVLAFGIGTVS GLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANAR MLGANKRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTAFALVLD WMVTVGEKRLMRWQPKSGETEKL
Sequences:
>Translated_263_residues MAFRPDSKGMLRVWQLLLLAVVLIVWHMATRSQQVAFFFGEPLIVAQRIWSWFIVERDIYLHLGVTLLETVLAFGIGTVS GLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANAR MLGANKRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTAFALVLD WMVTVGEKRLMRWQPKSGETEKL >Mature_262_residues AFRPDSKGMLRVWQLLLLAVVLIVWHMATRSQQVAFFFGEPLIVAQRIWSWFIVERDIYLHLGVTLLETVLAFGIGTVSG LGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARM LGANKRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTAFALVLDW MVTVGEKRLMRWQPKSGETEKL
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=28.2258064516129, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081802, Length=252, Percent_Identity=24.2063492063492, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789033, Length=163, Percent_Identity=27.6073619631902, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29035; Mature: 28904
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRPDSKGMLRVWQLLLLAVVLIVWHMATRSQQVAFFFGEPLIVAQRIWSWFIVERDIY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LHLGVTLLETVLAFGIGTVSGLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANKRQLLRHVYLPSATS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCHHH WVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTAFALVLD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH WMVTVGEKRLMRWQPKSGETEKL HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AFRPDSKGMLRVWQLLLLAVVLIVWHMATRSQQVAFFFGEPLIVAQRIWSWFIVERDIY CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LHLGVTLLETVLAFGIGTVSGLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANKRQLLRHVYLPSATS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCHHH WVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTAFALVLD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH WMVTVGEKRLMRWQPKSGETEKL HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]