Click here to switch to the map view.

The map label for this gene is yccA [H]

Identifier: 94311049

GI number: 94311049

Start: 2292802

End: 2293509

Strand: Direct

Name: yccA [H]

Synonym: Rmet_2111

Alternate gene names: 94311049

Gene position: 2292802-2293509 (Clockwise)

Preceding gene: 94311032

Following gene: 94311051

Centisome position: 58.37

GC content: 60.31

Gene sequence:

>708_bases
ATGAACAACAAGCTGAATACCTATGGGTTCGGCAATAGTGCTGCGAGCGTCACTGATGTAGCCGTCCGCAACCGGGTCCT
TCGTAATACTTACTGGCTGCTGGCCATTTCGATGATTCCAACCGTGATCGGCGCCTGGATCGGCGTGGTCACTGGTTTCA
CCGCGATGATCGCTGGCAGCCCGATGATGTCGGCCGTGCTGTTCCTCGCGGTCGCCTTCGGCTTCATGTTCGCCATCGAG
AAGACCAAGAACAGCGGCATGGGCGTGGTCCTGCTGCTGGCCTTCACCTTCTTCATGGGTCTGATGCTGGCACGCATCCT
CAGCTTCACGCTGTCGTTCTCGAACGGCCCCGCGCTGATCATGTACGCCTTTGGCGGTACCGCAGCGGTTTTCGGCGTGA
TGGCCACCATTGCCAGCGTGAGCAAGCGTGATTTCTCCGGCTTGGCCAAGTTCCTGTTCGTCGGCGTGATCCTGCTGATC
CTGGCCAGCCTGGCCAACATCTGGCTGCAACTGCCGGCGCTGATGATCACGCTGTCGGTGATCGCCATCGGCATCTTCTC
GGCGTTCATCCTGGTGGACGTGCAGCGCGTGGTGAATGGCGGCGAAACCAACTACGTGACCGCCACGCTCGCGATCTACC
TGGACGTGTACAACGTGTTCGTGAACCTGCTGGCCCTGCTCGGCATCGCAGGCGGCAGCCGCGACTGA

Upstream 100 bases:

>100_bases
TACAAAGCCCCCTTGCAAATCCGCGGGCGCGATGCCACATTGGCGCTGTGCTGGCCGGGTTGCCCCGGCGCCTCACTGAT
ATCTGATGACAGGAGTCACC

Downstream 100 bases:

>100_bases
CCTGCATCTGCCAACGAAAAAAAGCCGCCCTCGGGCGGTTTTTTTCATGGGTGCGCCATGTGGATTCAGTCGCGCTCGAA
CACCGCGATCGACTCCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGSPMMSAVLFLAVAFGFMFAIE
KTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALIMYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLI
LASLANIWLQLPALMITLSVIAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD

Sequences:

>Translated_235_residues
MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGSPMMSAVLFLAVAFGFMFAIE
KTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALIMYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLI
LASLANIWLQLPALMITLSVIAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD
>Mature_235_residues
MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGSPMMSAVLFLAVAFGFMFAIE
KTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALIMYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLI
LASLANIWLQLPALMITLSVIAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=224, Percent_Identity=37.9464285714286, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1787004, Length=113, Percent_Identity=35.3982300884956, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24985; Mature: 24985

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PMMSAVLFLAVAFGFMFAIEKTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLILASLANIWLQLPALMITLSV
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PMMSAVLFLAVAFGFMFAIEKTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLILASLANIWLQLPALMITLSV
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]