| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is purA
Identifier: 94311034
GI number: 94311034
Start: 2275730
End: 2277073
Strand: Reverse
Name: purA
Synonym: Rmet_2096
Alternate gene names: 94311034
Gene position: 2277073-2275730 (Counterclockwise)
Preceding gene: 94311035
Following gene: 94311033
Centisome position: 57.97
GC content: 63.24
Gene sequence:
>1344_bases ATGTCCGCATCCGCAGTAGGCCAGGGACGCAATGTCGTCGTGATCGGAACCCAATGGGGTGACGAAGGCAAAGGGAAAAT CGTCGATTGGCTTACCGATCATGCTAAAGGTGTGGTGCGGTTCCAGGGCGGCCACAACGCTGGCCATACGCTCATCATCG GCGGCAAGAAGACCATTCTGCGACTGATCCCGTCGGGGATCATGCGCGAAAGCACCGTCTGCTATATCGGCAACGGTGTG GTGCTGTCGCCTGAGGCGCTGTTCCGCGAAATCGAAGAGCTCGAGTCTGCCGGCCTGCAGGTGCAGAATCGCCTGCGCAT TTCCGAAGCCGCTACGCTGATCCTGCCGTACCACGTGGCCATCGACAAGGCACGTGAAGCCCGCCGCGGCGCCGCCAAGA TCGGCACGACGGGACGCGGCATCGGCCCGGCATACGAAGACAAGGTGGCTCGCCGCGCGCTGCGCGTGCAGGACCTGTTC GATCCGAAGCACTTCGCTGAGCGTCTGCGCGAGAACGTCGAATTCCATAACTTCATGCTGACTCAGTACCTCGGCGCCGA AGCCGTCGACTATCAGCAGATCCTGGACGAATCGCTGGCATTCGCGCCGCGCCTGAAGCCGATGGTGGCCGATGTGTCGG CCGAGTTGTACGCTGTGAATGCGGCAGGCAATAACCTGATGTTCGAAGGCGCGCAAGGCACGCTGCTCGACGTGGATCAC GGCACCTATCCGTTCGTGACCTCGAGCAACTGCGTGGCCGGCGCCGCAGCGGCTGGTGCGGGCGTGGGCCCGGGTCGCCT GAACTACATCCTTGGCATCACCAAGGCGTACTGCACGCGCGTTGGCGCTGGTCCGTTCCCGAGCGAACTGTACGACAACG ACAACCCTGCCCGTCAGGATGCCGTGGGCGTGCGCCTGGCCAACGTCGGCAAGGAATTCGGTTCCGTGACCGGCCGTCCG CGCCGCACTGGCTGGCTCGATGCCGCCGCGCTGAAGCGCTCGGTGCAGATCAACGGTGTGTCCGGTCTGTGCATGACCAA GCTGGACGTGCTCGATGGTCTGGAAACGATCAAGCTGTGCGTAGGCTACGAGCTCGACGGCAAGCGCGTCGATATCCTGC CGCGTGGCTCGGATGCCGTGGCCGCTTGCGTGCCGGTGTACGAAGAGTTTCCGGGCTGGAACGAATCGACCTTTGGCGTG AAGACCTGGGATGCGCTGCCCGAAGCGGCACGCGTTTACCTGAAGCGAATCGAGGAAGTGGTCGGCATTCCGATCGACAT GGTGTCGACCGGTCCGGACCGCGACGAGACGATTCTGCTGCGCCATCCGTACCAGGTCGCCTGA
Upstream 100 bases:
>100_bases CCGCATTGGACAACAATCGTCTGTCATACGCGTGCCCGAAAACCGGGAACCGTAGAACAACGAGAGTAGAATACGTTTTT AACCTTCTGACCAATTCAAC
Downstream 100 bases:
>100_bases CCCGCCTGCATTACCCCGTGAGCATGATCGTGGCGCCACGAGCGCCACGGCCTCACAGATAGTCCTCGGCCCGCGATATG CGGGCCGATGCTTTATCCAT
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSASAVGQGRNVVVIGTQWGDEGKGKIVDWLTDHAKGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRESTVCYIGNGV VLSPEALFREIEELESAGLQVQNRLRISEAATLILPYHVAIDKAREARRGAAKIGTTGRGIGPAYEDKVARRALRVQDLF DPKHFAERLRENVEFHNFMLTQYLGAEAVDYQQILDESLAFAPRLKPMVADVSAELYAVNAAGNNLMFEGAQGTLLDVDH GTYPFVTSSNCVAGAAAAGAGVGPGRLNYILGITKAYCTRVGAGPFPSELYDNDNPARQDAVGVRLANVGKEFGSVTGRP RRTGWLDAAALKRSVQINGVSGLCMTKLDVLDGLETIKLCVGYELDGKRVDILPRGSDAVAACVPVYEEFPGWNESTFGV KTWDALPEAARVYLKRIEEVVGIPIDMVSTGPDRDETILLRHPYQVA
Sequences:
>Translated_447_residues MSASAVGQGRNVVVIGTQWGDEGKGKIVDWLTDHAKGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRESTVCYIGNGV VLSPEALFREIEELESAGLQVQNRLRISEAATLILPYHVAIDKAREARRGAAKIGTTGRGIGPAYEDKVARRALRVQDLF DPKHFAERLRENVEFHNFMLTQYLGAEAVDYQQILDESLAFAPRLKPMVADVSAELYAVNAAGNNLMFEGAQGTLLDVDH GTYPFVTSSNCVAGAAAAGAGVGPGRLNYILGITKAYCTRVGAGPFPSELYDNDNPARQDAVGVRLANVGKEFGSVTGRP RRTGWLDAAALKRSVQINGVSGLCMTKLDVLDGLETIKLCVGYELDGKRVDILPRGSDAVAACVPVYEEFPGWNESTFGV KTWDALPEAARVYLKRIEEVVGIPIDMVSTGPDRDETILLRHPYQVA >Mature_446_residues SASAVGQGRNVVVIGTQWGDEGKGKIVDWLTDHAKGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRESTVCYIGNGVV LSPEALFREIEELESAGLQVQNRLRISEAATLILPYHVAIDKAREARRGAAKIGTTGRGIGPAYEDKVARRALRVQDLFD PKHFAERLRENVEFHNFMLTQYLGAEAVDYQQILDESLAFAPRLKPMVADVSAELYAVNAAGNNLMFEGAQGTLLDVDHG TYPFVTSSNCVAGAAAAGAGVGPGRLNYILGITKAYCTRVGAGPFPSELYDNDNPARQDAVGVRLANVGKEFGSVTGRPR RTGWLDAAALKRSVQINGVSGLCMTKLDVLDGLETIKLCVGYELDGKRVDILPRGSDAVAACVPVYEEFPGWNESTFGVK TWDALPEAARVYLKRIEEVVGIPIDMVSTGPDRDETILLRHPYQVA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=444, Percent_Identity=40.7657657657658, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI34577063, Length=442, Percent_Identity=39.1402714932127, Blast_Score=295, Evalue=6e-80, Organism=Homo sapiens, GI40316944, Length=405, Percent_Identity=39.2592592592593, Blast_Score=286, Evalue=3e-77, Organism=Escherichia coli, GI1790620, Length=437, Percent_Identity=61.7848970251716, Blast_Score=553, Evalue=1e-158, Organism=Caenorhabditis elegans, GI25146555, Length=443, Percent_Identity=41.7607223476298, Blast_Score=324, Evalue=7e-89, Organism=Caenorhabditis elegans, GI25146553, Length=443, Percent_Identity=41.7607223476298, Blast_Score=323, Evalue=8e-89, Organism=Saccharomyces cerevisiae, GI6324109, Length=437, Percent_Identity=39.3592677345538, Blast_Score=315, Evalue=7e-87, Organism=Drosophila melanogaster, GI21356033, Length=430, Percent_Identity=39.7674418604651, Blast_Score=305, Evalue=3e-83,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_RALME (Q1LLK1)
Other databases:
- EMBL: CP000352 - RefSeq: YP_584244.1 - ProteinModelPortal: Q1LLK1 - SMR: Q1LLK1 - STRING: Q1LLK1 - GeneID: 4038904 - GenomeReviews: CP000352_GR - KEGG: rme:Rmet_2096 - eggNOG: COG0104 - HOGENOM: HBG658237 - OMA: KRGRLQQ - PhylomeDB: Q1LLK1 - ProtClustDB: PRK01117 - BioCyc: RMET266264:RMET_2096-MONOMER - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 48262; Mature: 48130
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 21-21 ACT_SITE 49-49 BINDING 137-137 BINDING 151-151 BINDING 232-232 BINDING 247-247 BINDING 319-319 BINDING 321-321
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAVGQGRNVVVIGTQWGDEGKGKIVDWLTDHAKGVVRFQGGHNAGHTLIIGGKKTIL CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHH RLIPSGIMRESTVCYIGNGVVLSPEALFREIEELESAGLQVQNRLRISEAATLILPYHVA HHHHHHHHCCCCEEEECCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEHHHH IDKAREARRGAAKIGTTGRGIGPAYEDKVARRALRVQDLFDPKHFAERLRENVEFHNFML HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH TQYLGAEAVDYQQILDESLAFAPRLKPMVADVSAELYAVNAAGNNLMFEGAQGTLLDVDH HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCEEECCC GTYPFVTSSNCVAGAAAAGAGVGPGRLNYILGITKAYCTRVGAGPFPSELYDNDNPARQD CCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHH AVGVRLANVGKEFGSVTGRPRRTGWLDAAALKRSVQINGVSGLCMTKLDVLDGLETIKLC HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHHCCHHHHHHH VGYELDGKRVDILPRGSDAVAACVPVYEEFPGWNESTFGVKTWDALPEAARVYLKRIEEV CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHCHHHHHHHHHHHHHH VGIPIDMVSTGPDRDETILLRHPYQVA HCCCEEEECCCCCCCCEEEEECCCCCC >Mature Secondary Structure SASAVGQGRNVVVIGTQWGDEGKGKIVDWLTDHAKGVVRFQGGHNAGHTLIIGGKKTIL CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHH RLIPSGIMRESTVCYIGNGVVLSPEALFREIEELESAGLQVQNRLRISEAATLILPYHVA HHHHHHHHCCCCEEEECCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEHHHH IDKAREARRGAAKIGTTGRGIGPAYEDKVARRALRVQDLFDPKHFAERLRENVEFHNFML HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH TQYLGAEAVDYQQILDESLAFAPRLKPMVADVSAELYAVNAAGNNLMFEGAQGTLLDVDH HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCEEECCC GTYPFVTSSNCVAGAAAAGAGVGPGRLNYILGITKAYCTRVGAGPFPSELYDNDNPARQD CCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHH AVGVRLANVGKEFGSVTGRPRRTGWLDAAALKRSVQINGVSGLCMTKLDVLDGLETIKLC HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHHCCHHHHHHH VGYELDGKRVDILPRGSDAVAACVPVYEEFPGWNESTFGVKTWDALPEAARVYLKRIEEV CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHCHHHHHHHHHHHHHH VGIPIDMVSTGPDRDETILLRHPYQVA HCCCEEEECCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA