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The map label for this gene is ugpQ [H]

Identifier: 94310989

GI number: 94310989

Start: 2222601

End: 2223338

Strand: Reverse

Name: ugpQ [H]

Synonym: Rmet_2051

Alternate gene names: 94310989

Gene position: 2223338-2222601 (Counterclockwise)

Preceding gene: 94310990

Following gene: 94310988

Centisome position: 56.6

GC content: 64.91

Gene sequence:

>738_bases
ATGACGAATTGGCCCTATCCCCGCTTTATTGCCCATCGCGGCGCGGGCAAGCTGGCTCCCGAAAACACGCTGGCCGCGTT
TCGGCACGGTGCGTCGTTCGGCTACCGGATGTTCGAGTTCGACGTGAAGCTGTCTGCCGACGGCAAGCCGATCCTGATGC
ACGATGCGACGCTGGATCGCACTACGACCGGCAAAGGGCGTGTCGATGCGCTGACGCTGGGCGAACTGGCGGCGCTGGAT
GCTGGCGGCTGGCACAGTCCCGCGTACGCGGGCGAGCCGGTGCCGACGCTGGCGGCCATTGCTCGCTATACGCAGGCCAA
TGGCTTCATGGTCAATATTGAGATCAAGCCGGTGCCAGGGACCGAGTATCGGACTGGTGCAGCCGTGGCGCTTGACGCAC
TTTCACTGTGGAGGGGTGCTGGCACGCCGCCGTTGCTGTCCTCGTTCTCGGAAGTGGCGTTGGAGGCCGCGCATCAGGTG
GCGCCAGACCTCCCGCGTGCCTTGCTGCTGGATACACTGCCTGCCGATTGGCTCGAGCGGCTGCGCCAGCTGGAATGCGT
GGCGCTCGACGCCAACCACCGTGAACTCGATGCTGCTGTCATCGGCGCCGCGCATTCGGCTGGGTTCAAGGTCCTCTGCT
ACACGGTCAACGACCGGGCGAGGGCAGCGAACCTGCTGTCATGGGGGCTGGACGGCTTGATCACCGATGCGGTCGATCAG
ATCGCGCCACAGTCCTGA

Upstream 100 bases:

>100_bases
AGACGCAGGTGCGTGCCGGTGACAAGCTGCCGATTACGGCGTCGGCCGAGCATCTGCATTTCTTCGACGTGCAGTCGGGC
AAGCGTATCGAGGCTCAGGC

Downstream 100 bases:

>100_bases
ACAGTCCGTCTTGTTTTGCATCACGAAAAGTCCCTACGAGTCCAGGGCAAACGTGCTATGCTTCGCGAGTGAAGACTTAG
GTCCTTCCCCGCACAACTTG

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTNWPYPRFIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSADGKPILMHDATLDRTTTGKGRVDALTLGELAALD
AGGWHSPAYAGEPVPTLAAIARYTQANGFMVNIEIKPVPGTEYRTGAAVALDALSLWRGAGTPPLLSSFSEVALEAAHQV
APDLPRALLLDTLPADWLERLRQLECVALDANHRELDAAVIGAAHSAGFKVLCYTVNDRARAANLLSWGLDGLITDAVDQ
IAPQS

Sequences:

>Translated_245_residues
MTNWPYPRFIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSADGKPILMHDATLDRTTTGKGRVDALTLGELAALD
AGGWHSPAYAGEPVPTLAAIARYTQANGFMVNIEIKPVPGTEYRTGAAVALDALSLWRGAGTPPLLSSFSEVALEAAHQV
APDLPRALLLDTLPADWLERLRQLECVALDANHRELDAAVIGAAHSAGFKVLCYTVNDRARAANLLSWGLDGLITDAVDQ
IAPQS
>Mature_244_residues
TNWPYPRFIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSADGKPILMHDATLDRTTTGKGRVDALTLGELAALDA
GGWHSPAYAGEPVPTLAAIARYTQANGFMVNIEIKPVPGTEYRTGAAVALDALSLWRGAGTPPLLSSFSEVALEAAHQVA
PDLPRALLLDTLPADWLERLRQLECVALDANHRELDAAVIGAAHSAGFKVLCYTVNDRARAANLLSWGLDGLITDAVDQI
APQS

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=90, Percent_Identity=45.5555555555556, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI21361649, Length=101, Percent_Identity=41.5841584158416, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI284055245, Length=101, Percent_Identity=41.5841584158416, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI284055240, Length=101, Percent_Identity=41.5841584158416, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI284055242, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1789858, Length=244, Percent_Identity=52.0491803278688, Blast_Score=251, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17542344, Length=115, Percent_Identity=36.5217391304348, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26211; Mature: 26080

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNWPYPRFIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSADGKPILMHDATLDR
CCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
TTTGKGRVDALTLGELAALDAGGWHSPAYAGEPVPTLAAIARYTQANGFMVNIEIKPVPG
CCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
TEYRTGAAVALDALSLWRGAGTPPLLSSFSEVALEAAHQVAPDLPRALLLDTLPADWLER
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
LRQLECVALDANHRELDAAVIGAAHSAGFKVLCYTVNDRARAANLLSWGLDGLITDAVDQ
HHHCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCHHHHHHHHHHH
IAPQS
HCCCC
>Mature Secondary Structure 
TNWPYPRFIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSADGKPILMHDATLDR
CCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
TTTGKGRVDALTLGELAALDAGGWHSPAYAGEPVPTLAAIARYTQANGFMVNIEIKPVPG
CCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
TEYRTGAAVALDALSLWRGAGTPPLLSSFSEVALEAAHQVAPDLPRALLLDTLPADWLER
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
LRQLECVALDANHRELDAAVIGAAHSAGFKVLCYTVNDRARAANLLSWGLDGLITDAVDQ
HHHCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCHHHHHHHHHHH
IAPQS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]