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The map label for this gene is scpB [H]

Identifier: 94310973

GI number: 94310973

Start: 2203917

End: 2204825

Strand: Reverse

Name: scpB [H]

Synonym: Rmet_2035

Alternate gene names: 94310973

Gene position: 2204825-2203917 (Counterclockwise)

Preceding gene: 94310974

Following gene: 94310972

Centisome position: 56.13

GC content: 64.03

Gene sequence:

>909_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACCGCGCTGATCTGTGCGCAGGAGCCGTTGCGCGTTGGTGATCTGCG
ACGGTTGTTCGCCGACGACGTCGGTGCCGACACCATCCGGGTTCTACTCGAAGAGCTGCGCAACGACTGGCAGCAGCGCG
GGGTGGAGCTCGTGGCCCTGGCCAGCGGTTGGCGGTTCCAGAGCCGTCCCGAGATGCGCGAGTTTCTTGACCGACTCAAT
CCGGAAAAGCCGCCGAAGTACTCGCGTGCCGTGATGGAAACGCTAGCGATCATCGCGTATCGCCAGCCGGTGACGCGCGG
TGACATCGAAGAGATCCGGGGCGTGACGGTCAGCACGGAAGTGGTCAAGAAGCTTGAGGATCGGGACTGGATCGAAGTCA
TCGGTCACCGGGACGTGCCTGGCCGCCCCGCGTTGTACGCAACGACCAAGGCATTCCTGGATGACCTCGGTCTGCGCTCG
CTGGATGAGTTACCGCCGCTCGAGGATGCCCAGGCCCAGGCCCAGGCGGCACTGCTGGATCAGCAGGCCATCGATTTCGA
GGCGGTCGCGACGGCGAATCCGCCTGCTGGTGACGAGGAAGCCTTTTCGGAGGCTACCGTTGGGGTGGCTGAGACGGGCG
AGCCGGCAGTTGAGTCGTTGTCGGTCGAGCCGCAATCCGAAGATCTGTCCGGTGGCGCGAGCGATGCCGCCGGCAATGAA
AACGAACAGAACGACAGCGTCGCGCAGTTGCCCGAGGGTGATGGGCATGACGATGACGCGCCGGTGGCCCAGGCCAACGG
ATTCCATGTGGACACAGAGTCTTCCTCGCAGGAGGACGCCGCAGTTCCGGCTCGCGACGGTGATATGCCGCTGACGACCG
AGGACGACGACGAGCGCGTGTCCAACTGA

Upstream 100 bases:

>100_bases
GCGATGAGATGGCGGTGGCTTAGGCCTCGCTGTATCTGCAATCTCCAGTGCTTCAGGATTCGTCCAGAAGCAGGTGCAAA
GACAGGCTGCACACAATCAC

Downstream 100 bases:

>100_bases
ACAACATGCAACATCGATAGTGAATACTTTGTCTGATTCCGCTGAGCAAGACGTCCGCCAGCCGGACGTGCCGGGCGATA
CCGGCGCAGCCCCCGAGGGT

Product: putative transcriptional regulator (ScpB/YpuH-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNTQEAKIVLETALICAQEPLRVGDLRRLFADDVGADTIRVLLEELRNDWQQRGVELVALASGWRFQSRPEMREFLDRLN
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEEIRGVTVSTEVVKKLEDRDWIEVIGHRDVPGRPALYATTKAFLDDLGLRS
LDELPPLEDAQAQAQAALLDQQAIDFEAVATANPPAGDEEAFSEATVGVAETGEPAVESLSVEPQSEDLSGGASDAAGNE
NEQNDSVAQLPEGDGHDDDAPVAQANGFHVDTESSSQEDAAVPARDGDMPLTTEDDDERVSN

Sequences:

>Translated_302_residues
MNTQEAKIVLETALICAQEPLRVGDLRRLFADDVGADTIRVLLEELRNDWQQRGVELVALASGWRFQSRPEMREFLDRLN
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEEIRGVTVSTEVVKKLEDRDWIEVIGHRDVPGRPALYATTKAFLDDLGLRS
LDELPPLEDAQAQAQAALLDQQAIDFEAVATANPPAGDEEAFSEATVGVAETGEPAVESLSVEPQSEDLSGGASDAAGNE
NEQNDSVAQLPEGDGHDDDAPVAQANGFHVDTESSSQEDAAVPARDGDMPLTTEDDDERVSN
>Mature_302_residues
MNTQEAKIVLETALICAQEPLRVGDLRRLFADDVGADTIRVLLEELRNDWQQRGVELVALASGWRFQSRPEMREFLDRLN
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEEIRGVTVSTEVVKKLEDRDWIEVIGHRDVPGRPALYATTKAFLDDLGLRS
LDELPPLEDAQAQAQAALLDQQAIDFEAVATANPPAGDEEAFSEATVGVAETGEPAVESLSVEPQSEDLSGGASDAAGNE
NEQNDSVAQLPEGDGHDDDAPVAQANGFHVDTESSSQEDAAVPARDGDMPLTTEDDDERVSN

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 32872; Mature: 32872

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLRVGDLRRLFADDVGADTIRVLLEELRNDWQQRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE
ASGWRFQSRPEMREFLDRLNPEKPPKYSRAVMETLAIIAYRQPVTRGDIEEIRGVTVSTE
ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHH
VVKKLEDRDWIEVIGHRDVPGRPALYATTKAFLDDLGLRSLDELPPLEDAQAQAQAALLD
HHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHH
QQAIDFEAVATANPPAGDEEAFSEATVGVAETGEPAVESLSVEPQSEDLSGGASDAAGNE
HHHCCHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
NEQNDSVAQLPEGDGHDDDAPVAQANGFHVDTESSSQEDAAVPARDGDMPLTTEDDDERV
CCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
SN
CC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLRVGDLRRLFADDVGADTIRVLLEELRNDWQQRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE
ASGWRFQSRPEMREFLDRLNPEKPPKYSRAVMETLAIIAYRQPVTRGDIEEIRGVTVSTE
ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHH
VVKKLEDRDWIEVIGHRDVPGRPALYATTKAFLDDLGLRSLDELPPLEDAQAQAQAALLD
HHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHH
QQAIDFEAVATANPPAGDEEAFSEATVGVAETGEPAVESLSVEPQSEDLSGGASDAAGNE
HHHCCHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
NEQNDSVAQLPEGDGHDDDAPVAQANGFHVDTESSSQEDAAVPARDGDMPLTTEDDDERV
CCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
SN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]