| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ylaK [H]
Identifier: 94310908
GI number: 94310908
Start: 2146081
End: 2147775
Strand: Direct
Name: ylaK [H]
Synonym: Rmet_1970
Alternate gene names: 94310908
Gene position: 2146081-2147775 (Clockwise)
Preceding gene: 94310907
Following gene: 94310909
Centisome position: 54.63
GC content: 64.13
Gene sequence:
>1695_bases ATGCCGCTGCCTACCATGCCCGCCAAGCCTGCCCAACTGCTGGACCCGAGCGAGTTCGCCCCGGTCACACTGCCCAAGGC CAAAGTCGCGCAGGGTAAGAAACCTGTGCCGGCCCTCGAGCGTGTGGCATTGCTCGAGACCGGCGACACCAATGCGCCTG CCACCGCGCGCGCTGGCAGCACCACCCGGGCCAAGACCACCGAAGCCCCGGCATCGACCAAGGCTCCGTCCGCGACGCCA GCCGTCAGCCTGGTGCAGCCCGGCGCCAGCCCCACGCGCCGCGCGCGCAAGGCCACCGGCCCGAGCAAGCTGTTCGTCCT CGACACCAACGTGCTGATGCACGATCCGTCGTCGCTGTTCCGCTTCGAAGAGCATGACATCTATCTGCCGATGATGACGC TCGAGGAACTGGACAACCACAAGAAAGGCATGAGCGAAGTCGCGCGTAACGCGCGCACGGTCAGCCGGACGTTGGACCAG CTCGTGGGAGGTACCGACGGCGTGCTCGACGAAGGGCTGCCGCTGGCCAAGCTCGGCAATCGCGATGCCCAGGGCAAGCT GTTCTTCCAGACGCGCCTGAACGACATCAAGCTGCCGGAAGGCCTGCCGCAAGGCAAGGCGGACAACCAGATCCTTGCGG TGGTGAGCGCCCTGCAGCAGCAGTACCCGGACCGCCAGGTCGTGCTGGTGTCGAAAGACATCAACATGCGCATCAAGGCG CGCGCCCTGGGCCTGCCCGCCGAGGACTACTTCAACGACCAGGTCCTGGAAGACAAGGACCTGCTCTACTCGGGCGTGCT TCAGCTGCCCAACGATTTCTGGGCCAAGCACGGCAAAGGCGTGGAAAGCTGGCAGGATCCGAAGTCCGGCACGATGTTCT ATCGCCTGACCGGGCCGCTGGTGCCGTCGTTCCTGGTCAACCAGTTCGTCTACCTGGAGCCGATGGACGGCAGCCTGCCG CTCTATGCGCAGGTCAAGGAAATCAACGGCAAGACCGCCCTGCTGCAGACGCTGAAGGACTACACCCACAACAAGAACAA TGTGTGGAGCGTGGTAGCCCGCAATCGCGAGCAGAACTTCGCGCTGAACCTGCTGATGAGCGCGGACGTGGACTTCGTCA CGCTGCTCGGCCAGGCTGGCACCGGCAAGACGCTGCTGGCGCTTGCAGCCGGCCTCGAGCAGGTGCTGGACCAGAAACTC TACAACGAGATCATCGTCACGCGCGCCACCGTGCCCGTGGGCGAGGATATCGGATTCCTGCCCGGTACCGAGGAAGAGAA GATGCAGCCCTGGATGGGCGCGTTCGACGACAACCTCGAGGTACTGCAGAAGAGCGACGACAGCGCAGGCGAGTGGGGCC GTGCCGCCACGCAGGAGTTGATCCGTTCGCGCATCAAGGTCAAGAGCATGAACTTCATGCGCGGCCGCACCTTCGTGAAC AAGTTCGTGATCATCGATGAGGCGCAGAACCTGACACCGAAGCAGATGAAAACATTGGTCACGCGGGCGGGCCCTGGCAC GAAGATCGTCTGTCTGGGCAATATCGCGCAGATCGACACGCCTTACCTGACCGAAGGTTCGTCCGGCCTGACGTACGTGG TGGACCGCTTCAAGGGCTGGAGCCACAGCGGTCATGTGACGCTGGCACGCGGGGAACGCTCGCGCCTGGCCGACCACGCC GCTGACGTACTGTAG
Upstream 100 bases:
>100_bases CCTCAACCTCACTCTACGGTTTTCCGGTTTTCTGCCGTTCGTTGGCGTTGATGCGCCAGCCATTCCGCCCCCGTCTGTTC CCCTGAAAGGAAAGCCAAGC
Downstream 100 bases:
>100_bases GATCGGAGCTTGCAACGCCGAGTCCGCGGCTCTGGCCATCCAGACCGCGGGCGGCACGCTGCCGGGCGTGGCAACGAAAA AGGCGTCGGTGTCTTGCTGA
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MPLPTMPAKPAQLLDPSEFAPVTLPKAKVAQGKKPVPALERVALLETGDTNAPATARAGSTTRAKTTEAPASTKAPSATP AVSLVQPGASPTRRARKATGPSKLFVLDTNVLMHDPSSLFRFEEHDIYLPMMTLEELDNHKKGMSEVARNARTVSRTLDQ LVGGTDGVLDEGLPLAKLGNRDAQGKLFFQTRLNDIKLPEGLPQGKADNQILAVVSALQQQYPDRQVVLVSKDINMRIKA RALGLPAEDYFNDQVLEDKDLLYSGVLQLPNDFWAKHGKGVESWQDPKSGTMFYRLTGPLVPSFLVNQFVYLEPMDGSLP LYAQVKEINGKTALLQTLKDYTHNKNNVWSVVARNREQNFALNLLMSADVDFVTLLGQAGTGKTLLALAAGLEQVLDQKL YNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKSDDSAGEWGRAATQELIRSRIKVKSMNFMRGRTFVN KFVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWSHSGHVTLARGERSRLADHA ADVL
Sequences:
>Translated_564_residues MPLPTMPAKPAQLLDPSEFAPVTLPKAKVAQGKKPVPALERVALLETGDTNAPATARAGSTTRAKTTEAPASTKAPSATP AVSLVQPGASPTRRARKATGPSKLFVLDTNVLMHDPSSLFRFEEHDIYLPMMTLEELDNHKKGMSEVARNARTVSRTLDQ LVGGTDGVLDEGLPLAKLGNRDAQGKLFFQTRLNDIKLPEGLPQGKADNQILAVVSALQQQYPDRQVVLVSKDINMRIKA RALGLPAEDYFNDQVLEDKDLLYSGVLQLPNDFWAKHGKGVESWQDPKSGTMFYRLTGPLVPSFLVNQFVYLEPMDGSLP LYAQVKEINGKTALLQTLKDYTHNKNNVWSVVARNREQNFALNLLMSADVDFVTLLGQAGTGKTLLALAAGLEQVLDQKL YNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKSDDSAGEWGRAATQELIRSRIKVKSMNFMRGRTFVN KFVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWSHSGHVTLARGERSRLADHA ADVL >Mature_563_residues PLPTMPAKPAQLLDPSEFAPVTLPKAKVAQGKKPVPALERVALLETGDTNAPATARAGSTTRAKTTEAPASTKAPSATPA VSLVQPGASPTRRARKATGPSKLFVLDTNVLMHDPSSLFRFEEHDIYLPMMTLEELDNHKKGMSEVARNARTVSRTLDQL VGGTDGVLDEGLPLAKLGNRDAQGKLFFQTRLNDIKLPEGLPQGKADNQILAVVSALQQQYPDRQVVLVSKDINMRIKAR ALGLPAEDYFNDQVLEDKDLLYSGVLQLPNDFWAKHGKGVESWQDPKSGTMFYRLTGPLVPSFLVNQFVYLEPMDGSLPL YAQVKEINGKTALLQTLKDYTHNKNNVWSVVARNREQNFALNLLMSADVDFVTLLGQAGTGKTLLALAAGLEQVLDQKLY NEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKSDDSAGEWGRAATQELIRSRIKVKSMNFMRGRTFVNK FVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWSHSGHVTLARGERSRLADHAA DVL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=35.6020942408377, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI145693103, Length=169, Percent_Identity=39.0532544378698, Blast_Score=93, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 61796; Mature: 61665
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPTMPAKPAQLLDPSEFAPVTLPKAKVAQGKKPVPALERVALLETGDTNAPATARAGS CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEEEECCCCCCCCCCCCCC TTRAKTTEAPASTKAPSATPAVSLVQPGASPTRRARKATGPSKLFVLDTNVLMHDPSSLF CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEECCEEEECCHHHH RFEEHDIYLPMMTLEELDNHKKGMSEVARNARTVSRTLDQLVGGTDGVLDEGLPLAKLGN EECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC RDAQGKLFFQTRLNDIKLPEGLPQGKADNQILAVVSALQQQYPDRQVVLVSKDINMRIKA CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE RALGLPAEDYFNDQVLEDKDLLYSGVLQLPNDFWAKHGKGVESWQDPKSGTMFYRLTGPL EEECCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC VPSFLVNQFVYLEPMDGSLPLYAQVKEINGKTALLQTLKDYTHNKNNVWSVVARNREQNF HHHHHHCCEEEEECCCCCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCE ALNLLMSADVDFVTLLGQAGTGKTLLALAAGLEQVLDQKLYNEIIVTRATVPVGEDIGFL EEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC PGTEEEKMQPWMGAFDDNLEVLQKSDDSAGEWGRAATQELIRSRIKVKSMNFMRGRTFVN CCCCHHHCCCHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE KFVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGW EEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCC SHSGHVTLARGERSRLADHAADVL CCCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure PLPTMPAKPAQLLDPSEFAPVTLPKAKVAQGKKPVPALERVALLETGDTNAPATARAGS CCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEEEECCCCCCCCCCCCCC TTRAKTTEAPASTKAPSATPAVSLVQPGASPTRRARKATGPSKLFVLDTNVLMHDPSSLF CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEECCEEEECCHHHH RFEEHDIYLPMMTLEELDNHKKGMSEVARNARTVSRTLDQLVGGTDGVLDEGLPLAKLGN EECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC RDAQGKLFFQTRLNDIKLPEGLPQGKADNQILAVVSALQQQYPDRQVVLVSKDINMRIKA CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE RALGLPAEDYFNDQVLEDKDLLYSGVLQLPNDFWAKHGKGVESWQDPKSGTMFYRLTGPL EEECCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC VPSFLVNQFVYLEPMDGSLPLYAQVKEINGKTALLQTLKDYTHNKNNVWSVVARNREQNF HHHHHHCCEEEEECCCCCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCE ALNLLMSADVDFVTLLGQAGTGKTLLALAAGLEQVLDQKLYNEIIVTRATVPVGEDIGFL EEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC PGTEEEKMQPWMGAFDDNLEVLQKSDDSAGEWGRAATQELIRSRIKVKSMNFMRGRTFVN CCCCHHHCCCHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE KFVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGW EEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCC SHSGHVTLARGERSRLADHAADVL CCCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]