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The map label for this gene is yjeF [H]

Identifier: 94310816

GI number: 94310816

Start: 2039178

End: 2040785

Strand: Direct

Name: yjeF [H]

Synonym: Rmet_1878

Alternate gene names: 94310816

Gene position: 2039178-2040785 (Clockwise)

Preceding gene: 94310815

Following gene: 335055555

Centisome position: 51.91

GC content: 69.03

Gene sequence:

>1608_bases
ATGAGCACGACTGTCTCGCCTTCGACATCCCCGGACCCCGACGCGACGCCGGACCGCATCGCGCTGGATCCCGCCGGCAC
GGACGTTACGCCGCTTTACGACCTGACGACGATCCGTCGCGTGGAGCACGCCGGGCTGGCCGCGACCCCGCCTTTCACGT
TGATGTCCCGCGCGGGCGCTGCGGCAGCGGACTGGCTGCACGCATGGGTGCCGAATGGCCGCATCCTCTGCCTGGCTGGC
CCTGGCAACAACGGCGGCGACGCGCTGGTCGCCGCCCTGCGCCTGCATCAGCGCGGACGGCTCGTGGAAACCTGGCTGAT
CGGCGAAGCCGACCTGCTGCCCGCCGATGCGGCCCGCGCCTGGCTCGAGGCCCGCGCCGCCGGCGTGCCGCTCCTGGCGC
TGCCCAACGATGCCGATACCGGGATTCCTCCCTGGCCGAATGGATGCGCGGCAATCGTTGATGGATTGCTGGGGATCGGA
CTCAACCGTGCGGCCGACGGCAATATGGCGCGTTGGATTGATCATCTCAATAACTCGCACCTGCCGGTATTCTCGCTCGA
TATCCCGAGCGGATTGTTCGCCGACACCGGCGCCGGCAACCCGGCGGTCCGGGCACAACGCACGCTGACGTTCCTGGCTG
CCAAGCCGGGCCTGCTGACCCTGGATGGCCGCGATTGCGCTGGCGAGGTCGATATCGCACCACTCGGGCTCGACTATCCG
CCAGCCGAACATCCCGTGGCGGTGGTCAATCAGCCGCCGGGTTTTTCCCATTCGCTGCCGCGACGTGAGCACGCGGATAA
CAAAGGCAGCTTCGGCAGCCTGGCAGTGATCGGTGGCAGCCATGGAATGACCGGGGCCCCATTGCTTGGCGCGCGCGCCG
CCCTATATCTGGGCGCCGGTCGTGTCCATGTGGGATTCCTCGCGCAACCGGCACCCGCCATCGACCCGGTCCATCCGGAG
TTGATGCTGCACGCCGTGACGGAGCTTTCGCCCGGCGCGATGTCCGCCTACGTGGTCGGCCCCGGGATGGGCACGGGTGC
CTCCGCGCGCAAGCAACTGACGCAATTGATCGATATCTGCGCCAACGCGGCGACAGCCGCACCGCTGGTGCTCGATGCGG
ATGCGCTCAACCTGCTGGCTACCGATGGCACGCTGGCCCAGCAACTTGTCGAAAGCGGCGTGGCACACGTGATGACGCCC
CACCCGCTTGAGGCCGCGCGACTGCTGGGCAGCACCGTGGCCGATATCCAGCGCAACCGGCTGGCGGCCGCCACCGCGCT
GGCCACGCGGTGGCAGGCCACGATCGTACTCAAGGGCTCCGGGAGCGTGATCGCGTCCCCAGACGGCGCGCCGCCCGCGA
TCAATCCAACCGGCAATGCCGCGCTCTCCACCGCGGGCACCGGTGATGTCCTGGCCGGAATGATCGGCGCCCTGATCGCC
CAGGGCATGCCGATCGTCGCAGCCGCGCGCGCGGCGGTCTGGATTCACGGCCGCGCCGCCGACAGGCTAGTAGCGTCGGG
CACGGGCCCGGCTGGCATGACTGCCAGCGAGCTCTATCTTCCCGCCCGGGATATTTTCAACGCGTTGCTGCGCGGTGGCG
GCGCGTGA

Upstream 100 bases:

>100_bases
GACCAGATCGCCGCGAGCGCCGGCCAAGGCGACGGGCCAGCCATCGACATGGATGGGCTGACACCCGAACGTTACCGGCT
GGGCCCCGCCTGATACCGAT

Downstream 100 bases:

>100_bases
CGTCCCGCCAACGCCACCAACAATGCCGCGCGAATCACGCCAGACGCCGTCCAGGTGATCTCAGGTGATGCGCGCGGCGC
GGCACGCGTCGGACAATTGC

Product: putative carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSTTVSPSTSPDPDATPDRIALDPAGTDVTPLYDLTTIRRVEHAGLAATPPFTLMSRAGAAAADWLHAWVPNGRILCLAG
PGNNGGDALVAALRLHQRGRLVETWLIGEADLLPADAARAWLEARAAGVPLLALPNDADTGIPPWPNGCAAIVDGLLGIG
LNRAADGNMARWIDHLNNSHLPVFSLDIPSGLFADTGAGNPAVRAQRTLTFLAAKPGLLTLDGRDCAGEVDIAPLGLDYP
PAEHPVAVVNQPPGFSHSLPRREHADNKGSFGSLAVIGGSHGMTGAPLLGARAALYLGAGRVHVGFLAQPAPAIDPVHPE
LMLHAVTELSPGAMSAYVVGPGMGTGASARKQLTQLIDICANAATAAPLVLDADALNLLATDGTLAQQLVESGVAHVMTP
HPLEAARLLGSTVADIQRNRLAAATALATRWQATIVLKGSGSVIASPDGAPPAINPTGNAALSTAGTGDVLAGMIGALIA
QGMPIVAAARAAVWIHGRAADRLVASGTGPAGMTASELYLPARDIFNALLRGGGA

Sequences:

>Translated_535_residues
MSTTVSPSTSPDPDATPDRIALDPAGTDVTPLYDLTTIRRVEHAGLAATPPFTLMSRAGAAAADWLHAWVPNGRILCLAG
PGNNGGDALVAALRLHQRGRLVETWLIGEADLLPADAARAWLEARAAGVPLLALPNDADTGIPPWPNGCAAIVDGLLGIG
LNRAADGNMARWIDHLNNSHLPVFSLDIPSGLFADTGAGNPAVRAQRTLTFLAAKPGLLTLDGRDCAGEVDIAPLGLDYP
PAEHPVAVVNQPPGFSHSLPRREHADNKGSFGSLAVIGGSHGMTGAPLLGARAALYLGAGRVHVGFLAQPAPAIDPVHPE
LMLHAVTELSPGAMSAYVVGPGMGTGASARKQLTQLIDICANAATAAPLVLDADALNLLATDGTLAQQLVESGVAHVMTP
HPLEAARLLGSTVADIQRNRLAAATALATRWQATIVLKGSGSVIASPDGAPPAINPTGNAALSTAGTGDVLAGMIGALIA
QGMPIVAAARAAVWIHGRAADRLVASGTGPAGMTASELYLPARDIFNALLRGGGA
>Mature_534_residues
STTVSPSTSPDPDATPDRIALDPAGTDVTPLYDLTTIRRVEHAGLAATPPFTLMSRAGAAAADWLHAWVPNGRILCLAGP
GNNGGDALVAALRLHQRGRLVETWLIGEADLLPADAARAWLEARAAGVPLLALPNDADTGIPPWPNGCAAIVDGLLGIGL
NRAADGNMARWIDHLNNSHLPVFSLDIPSGLFADTGAGNPAVRAQRTLTFLAAKPGLLTLDGRDCAGEVDIAPLGLDYPP
AEHPVAVVNQPPGFSHSLPRREHADNKGSFGSLAVIGGSHGMTGAPLLGARAALYLGAGRVHVGFLAQPAPAIDPVHPEL
MLHAVTELSPGAMSAYVVGPGMGTGASARKQLTQLIDICANAATAAPLVLDADALNLLATDGTLAQQLVESGVAHVMTPH
PLEAARLLGSTVADIQRNRLAAATALATRWQATIVLKGSGSVIASPDGAPPAINPTGNAALSTAGTGDVLAGMIGALIAQ
GMPIVAAARAAVWIHGRAADRLVASGTGPAGMTASELYLPARDIFNALLRGGGA

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=230, Percent_Identity=29.1304347826087, Blast_Score=78, Evalue=3e-14,
Organism=Escherichia coli, GI1790609, Length=504, Percent_Identity=38.2936507936508, Blast_Score=237, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17554656, Length=239, Percent_Identity=28.8702928870293, Blast_Score=82, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322698, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 54356; Mature: 54224

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00147 ARGINASE_1 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTVSPSTSPDPDATPDRIALDPAGTDVTPLYDLTTIRRVEHAGLAATPPFTLMSRAGA
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
AAADWLHAWVPNGRILCLAGPGNNGGDALVAALRLHQRGRLVETWLIGEADLLPADAARA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
WLEARAAGVPLLALPNDADTGIPPWPNGCAAIVDGLLGIGLNRAADGNMARWIDHLNNSH
HHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
LPVFSLDIPSGLFADTGAGNPAVRAQRTLTFLAAKPGLLTLDGRDCAGEVDIAPLGLDYP
CCEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEECCCCCCCCCEEEECCCCCC
PAEHPVAVVNQPPGFSHSLPRREHADNKGSFGSLAVIGGSHGMTGAPLLGARAALYLGAG
CCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCEEEEECCC
RVHVGFLAQPAPAIDPVHPELMLHAVTELSPGAMSAYVVGPGMGTGASARKQLTQLIDIC
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
ANAATAAPLVLDADALNLLATDGTLAQQLVESGVAHVMTPHPLEAARLLGSTVADIQRNR
HCCHHCCCEEEECCHHEEEECCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAATALATRWQATIVLKGSGSVIASPDGAPPAINPTGNAALSTAGTGDVLAGMIGALIA
HHHHHHHHHCEEEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
QGMPIVAAARAAVWIHGRAADRLVASGTGPAGMTASELYLPARDIFNALLRGGGA
CCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
STTVSPSTSPDPDATPDRIALDPAGTDVTPLYDLTTIRRVEHAGLAATPPFTLMSRAGA
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
AAADWLHAWVPNGRILCLAGPGNNGGDALVAALRLHQRGRLVETWLIGEADLLPADAARA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
WLEARAAGVPLLALPNDADTGIPPWPNGCAAIVDGLLGIGLNRAADGNMARWIDHLNNSH
HHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
LPVFSLDIPSGLFADTGAGNPAVRAQRTLTFLAAKPGLLTLDGRDCAGEVDIAPLGLDYP
CCEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEECCCCCCCCCEEEECCCCCC
PAEHPVAVVNQPPGFSHSLPRREHADNKGSFGSLAVIGGSHGMTGAPLLGARAALYLGAG
CCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCEEEEECCC
RVHVGFLAQPAPAIDPVHPELMLHAVTELSPGAMSAYVVGPGMGTGASARKQLTQLIDIC
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
ANAATAAPLVLDADALNLLATDGTLAQQLVESGVAHVMTPHPLEAARLLGSTVADIQRNR
HCCHHCCCEEEECCHHEEEECCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAATALATRWQATIVLKGSGSVIASPDGAPPAINPTGNAALSTAGTGDVLAGMIGALIA
HHHHHHHHHCEEEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
QGMPIVAAARAAVWIHGRAADRLVASGTGPAGMTASELYLPARDIFNALLRGGGA
CCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]