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The map label for this gene is dadA [H]

Identifier: 94310815

GI number: 94310815

Start: 2037881

End: 2039170

Strand: Direct

Name: dadA [H]

Synonym: Rmet_1877

Alternate gene names: 94310815

Gene position: 2037881-2039170 (Clockwise)

Preceding gene: 94310814

Following gene: 94310816

Centisome position: 51.88

GC content: 67.91

Gene sequence:

>1290_bases
ATGCACGTGATCATCATCGGCGCCGGCGCAATCGGCGTCTGCTCGGCCTGGTACCTGCGCCAGGCCGGCTTCGAAGTCAC
TGTACTGGAGCGACGCGGCGCCCCCGCGCAGGAAGCCAGCTTTGGCAACGCGGGCATGATCGCCCCCGGCTACGTCACAC
CCTGGGCGGCGCCCGGGATGCCCGGCAAGATTGTGCGCTCACTGTTCCAGCACGCCTCGCCGGTCGTGTTCCGCCCAAGC
GTCGACCCCGCGATGTGGCGCTGGATCGTGCGCTGGCTGCGCGAATGCAACCCCGAAAGCTATCGCACCAACAAGCTGCG
GATGCAGCGTGTGGCGTTCTACAGCCGCGCCTGTCTGCACGAGCTTCGCTCGGCGCTCGAGATCGAGTACGAGCAATCAC
GTGGCTACCTGCAACTGTTTCGCACACAGCGCGACCTTGATCTCGCATCGCCTGCATTGGCGCTGCTGCGCGAGAACAAC
GTCCCGCATCAGCTCATCGACGCCGCCGGTTGCCGGCGTATCGAACCCGGCCTGACCGACGACACGCCACTAGCTGGCGG
CCTGCACCTTCCGGAGGATGAATCCGGCAATTGCCCGATCTTCGTGCGCAGACTGCACCAGCACGCGGAAGCCGCGGGGG
TGCGGTTTCGCTTCCAGACCGAAGTTGCCCGGTTGCGCAGGACGGACGGCCGCCTGACAGTCGAACTCGCCGCGCTCCGT
GGCCATGCCCGGGAAGTGCTCGATGCGGACCGCGTGCTGCTTGCCGCCGGCGTTGGCAGCGAGACGCTGCTGCGCCCGCT
GGGGCTGCGCCTGCCGCTCTACCCGGTCAAGGGTTACTCGGCCACGGTCATGGTGACGGACGAACTACAGGCGCCGCTAG
GCGCCCTGATGGACGAATCGTTCAAGGTGGCCATCACGCGCATGGGCAATCGACTGCGCGTGGCGGGCACCGCGGAGCTT
GGATCGCGCAAGCTCGATCTGCGGCCGGCCGCGTTGCAAACCCTGATCAAGGTCGCGCGCGACTGGTTTCCGGTAGCCGG
GCACTACAATGCCGCCACGCTCTGGGCCGGAGCGCGACCGATGCTGCCTGACGGCCCGCCCCTGATCGGCGCCACCCGCG
TGCCGGGCCTGTTTCTGAACCTCGGCCATGGCTCGACGGGCTGGGCGATGAGCTGCGGATCGGGCAAAATTGCCGCGGAC
CAGATCGCCGCGAGCGCCGGCCAAGGCGACGGGCCAGCCATCGACATGGATGGGCTGACACCCGAACGTTACCGGCTGGG
CCCCGCCTGA

Upstream 100 bases:

>100_bases
ATCACCGTGTGGCCCAGCGTGGTGACATGGCTGCCAGACGTGGTCATGGCGAAGGAGCTCAAATAGCGGCACTTCATCCT
GAAGGGGGCAAAGCTAGCGG

Downstream 100 bases:

>100_bases
TACCGATATGAGCACGACTGTCTCGCCTTCGACATCCCCGGACCCCGACGCGACGCCGGACCGCATCGCGCTGGATCCCG
CCGGCACGGACGTTACGCCG

Product: D-amino acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MHVIIIGAGAIGVCSAWYLRQAGFEVTVLERRGAPAQEASFGNAGMIAPGYVTPWAAPGMPGKIVRSLFQHASPVVFRPS
VDPAMWRWIVRWLRECNPESYRTNKLRMQRVAFYSRACLHELRSALEIEYEQSRGYLQLFRTQRDLDLASPALALLRENN
VPHQLIDAAGCRRIEPGLTDDTPLAGGLHLPEDESGNCPIFVRRLHQHAEAAGVRFRFQTEVARLRRTDGRLTVELAALR
GHAREVLDADRVLLAAGVGSETLLRPLGLRLPLYPVKGYSATVMVTDELQAPLGALMDESFKVAITRMGNRLRVAGTAEL
GSRKLDLRPAALQTLIKVARDWFPVAGHYNAATLWAGARPMLPDGPPLIGATRVPGLFLNLGHGSTGWAMSCGSGKIAAD
QIAASAGQGDGPAIDMDGLTPERYRLGPA

Sequences:

>Translated_429_residues
MHVIIIGAGAIGVCSAWYLRQAGFEVTVLERRGAPAQEASFGNAGMIAPGYVTPWAAPGMPGKIVRSLFQHASPVVFRPS
VDPAMWRWIVRWLRECNPESYRTNKLRMQRVAFYSRACLHELRSALEIEYEQSRGYLQLFRTQRDLDLASPALALLRENN
VPHQLIDAAGCRRIEPGLTDDTPLAGGLHLPEDESGNCPIFVRRLHQHAEAAGVRFRFQTEVARLRRTDGRLTVELAALR
GHAREVLDADRVLLAAGVGSETLLRPLGLRLPLYPVKGYSATVMVTDELQAPLGALMDESFKVAITRMGNRLRVAGTAEL
GSRKLDLRPAALQTLIKVARDWFPVAGHYNAATLWAGARPMLPDGPPLIGATRVPGLFLNLGHGSTGWAMSCGSGKIAAD
QIAASAGQGDGPAIDMDGLTPERYRLGPA
>Mature_429_residues
MHVIIIGAGAIGVCSAWYLRQAGFEVTVLERRGAPAQEASFGNAGMIAPGYVTPWAAPGMPGKIVRSLFQHASPVVFRPS
VDPAMWRWIVRWLRECNPESYRTNKLRMQRVAFYSRACLHELRSALEIEYEQSRGYLQLFRTQRDLDLASPALALLRENN
VPHQLIDAAGCRRIEPGLTDDTPLAGGLHLPEDESGNCPIFVRRLHQHAEAAGVRFRFQTEVARLRRTDGRLTVELAALR
GHAREVLDADRVLLAAGVGSETLLRPLGLRLPLYPVKGYSATVMVTDELQAPLGALMDESFKVAITRMGNRLRVAGTAEL
GSRKLDLRPAALQTLIKVARDWFPVAGHYNAATLWAGARPMLPDGPPLIGATRVPGLFLNLGHGSTGWAMSCGSGKIAAD
QIAASAGQGDGPAIDMDGLTPERYRLGPA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=429, Percent_Identity=42.6573426573427, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46713; Mature: 46713

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIIIGAGAIGVCSAWYLRQAGFEVTVLERRGAPAQEASFGNAGMIAPGYVTPWAAPGM
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PGKIVRSLFQHASPVVFRPSVDPAMWRWIVRWLRECNPESYRTNKLRMQRVAFYSRACLH
CHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ELRSALEIEYEQSRGYLQLFRTQRDLDLASPALALLRENNVPHQLIDAAGCRRIEPGLTD
HHHHHHEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
DTPLAGGLHLPEDESGNCPIFVRRLHQHAEAAGVRFRFQTEVARLRRTDGRLTVELAALR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCEEEEEEHHH
GHAREVLDADRVLLAAGVGSETLLRPLGLRLPLYPVKGYSATVMVTDELQAPLGALMDES
HHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCEEEECCCEEEEEEECCHHCHHHHHHCCC
FKVAITRMGNRLRVAGTAELGSRKLDLRPAALQTLIKVARDWFPVAGHYNAATLWAGARP
CEEEEEECCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
MLPDGPPLIGATRVPGLFLNLGHGSTGWAMSCGSGKIAADQIAASAGQGDGPAIDMDGLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEECCCCC
PERYRLGPA
HHHEECCCC
>Mature Secondary Structure
MHVIIIGAGAIGVCSAWYLRQAGFEVTVLERRGAPAQEASFGNAGMIAPGYVTPWAAPGM
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PGKIVRSLFQHASPVVFRPSVDPAMWRWIVRWLRECNPESYRTNKLRMQRVAFYSRACLH
CHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ELRSALEIEYEQSRGYLQLFRTQRDLDLASPALALLRENNVPHQLIDAAGCRRIEPGLTD
HHHHHHEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
DTPLAGGLHLPEDESGNCPIFVRRLHQHAEAAGVRFRFQTEVARLRRTDGRLTVELAALR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCEEEEEEHHH
GHAREVLDADRVLLAAGVGSETLLRPLGLRLPLYPVKGYSATVMVTDELQAPLGALMDES
HHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCEEEECCCEEEEEEECCHHCHHHHHHCCC
FKVAITRMGNRLRVAGTAELGSRKLDLRPAALQTLIKVARDWFPVAGHYNAATLWAGARP
CEEEEEECCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
MLPDGPPLIGATRVPGLFLNLGHGSTGWAMSCGSGKIAADQIAASAGQGDGPAIDMDGLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEECCCCC
PERYRLGPA
HHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA