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The map label for this gene is yiaN [C]

Identifier: 94310814

GI number: 94310814

Start: 2036536

End: 2037846

Strand: Direct

Name: yiaN [C]

Synonym: Rmet_1876

Alternate gene names: 94310814

Gene position: 2036536-2037846 (Clockwise)

Preceding gene: 94310813

Following gene: 94310815

Centisome position: 51.85

GC content: 63.16

Gene sequence:

>1311_bases
ATGAGCACCGTTCTCGTTGCCCTGATCCTGCTGCTGGTGATGATCGCCTTCCTGGCGATCGGCGCGTGGATTCCCGTGGC
GATCGCCGTGACCTCGTGGGTCGGCCTGGTGATCTTCTCCGACCACGACGCGCTGGTTAACCTGGCCAACTCCTGGTGGT
CGTCCAGTGCCTCCTACACGCTGGCATCGCTGCCCCTGTTCGTGTGGATGGGAGAAATCCTGTTCCGCACCAAGCTCTCC
GAGCAGATGTTCAATGGCCTCTCCCCGTGGCTCAACTGGCTGCCGGGCCGTCTCATGCACGTCAACATTCTCGGCTGCGG
CATCTTCGGTTCGGTGTCGGGGTCGTCGGCGGCCACCTGCGCCACGATCGCCAAGTCGGCACTGCCCGAACTGACCCGAC
GCGGCTACGACGAGCGCATCACACTCGGCTCGCTGTCGACGGCGGGCACGCTGGGCATTCTGATCCCGCCATCGATCACG
ATGGTCGTGTATGCGGTGTCCGCCGACGTCTCCATCATCCGCGTGTTCCTCGCCGGGTTCCTGCCGGGCCTGTTACTGAT
GATCCTGTTTTCGGGATACATCGTGGTCTGGGCGCTGATGAATCCTGAGAAGACCCCTGCGGCCGAGACGTTCGGCTGGT
CGGCCCGGCTCGCGTCGATCCGGCAGCTCATGCCCTGCATCATCCTGATCGCGTTCATCACGTGGATCATGATGGCCGGG
TACTCGACGGCTACCGAGGCTGCCGCGTATGGCGTGGTGGCATCGCTCGCGCTGGCCTGGGCAGGCGGCTCGCTGACGCG
CAAGGCATTCTGGGAGAGCCTGATGTCGGCCACCCGGCTGACCGCGATGATCATGTTCGTGCTCGGGGCGACGTCATTTC
TGTCGGTCACGATGAGTTTCACCGGCATTCCGCGCGCACTGGCCGAATGGGTGGCGGCGCTGCACCTGTCGCCGTGGGCG
CTGATCGCCGTCCTGACCATCATCTATATCCTGCTCGGCACGGCACTCGACGGCATCTCGATGATCGCGCTGACCACGGC
CACCGTCCTGCCGATGGTACAGGCCGCCGGCTTCGATCTGGTATGGTTTGGCATCTTCATCGTGCTGCTGGTGGAAATCG
CCGAGGTCACGCCACCCGTCGGATTCAACTTGTTCGTGCTCCAGAGCATGACCGGCAAGGACAGCAACTACATCGCCAGG
GTGTCGTTGCCGTTCTTCATGATGATGGTGCTGGCGATCGGCATCATCACCGTGTGGCCCAGCGTGGTGACATGGCTGCC
AGACGTGGTCATGGCGAAGGAGCTCAAATAG

Upstream 100 bases:

>100_bases
TCGGCGACGAATGGCTGCGTGTGGTACGCCGGCAGAAACCGCGCTACCAGCTCGCGCAGGAGGCCAAGCTGGCCGCTGGC
GACTTCGGGGAGACCGTCTG

Downstream 100 bases:

>100_bases
CGGCACTTCATCCTGAAGGGGGCAAAGCTAGCGGATGCACGTGATCATCATCGGCGCCGGCGCAATCGGCGTCTGCTCGG
CCTGGTACCTGCGCCAGGCC

Product: TRAP-type transporter, large permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSTVLVALILLLVMIAFLAIGAWIPVAIAVTSWVGLVIFSDHDALVNLANSWWSSSASYTLASLPLFVWMGEILFRTKLS
EQMFNGLSPWLNWLPGRLMHVNILGCGIFGSVSGSSAATCATIAKSALPELTRRGYDERITLGSLSTAGTLGILIPPSIT
MVVYAVSADVSIIRVFLAGFLPGLLLMILFSGYIVVWALMNPEKTPAAETFGWSARLASIRQLMPCIILIAFITWIMMAG
YSTATEAAAYGVVASLALAWAGGSLTRKAFWESLMSATRLTAMIMFVLGATSFLSVTMSFTGIPRALAEWVAALHLSPWA
LIAVLTIIYILLGTALDGISMIALTTATVLPMVQAAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQSMTGKDSNYIAR
VSLPFFMMMVLAIGIITVWPSVVTWLPDVVMAKELK

Sequences:

>Translated_436_residues
MSTVLVALILLLVMIAFLAIGAWIPVAIAVTSWVGLVIFSDHDALVNLANSWWSSSASYTLASLPLFVWMGEILFRTKLS
EQMFNGLSPWLNWLPGRLMHVNILGCGIFGSVSGSSAATCATIAKSALPELTRRGYDERITLGSLSTAGTLGILIPPSIT
MVVYAVSADVSIIRVFLAGFLPGLLLMILFSGYIVVWALMNPEKTPAAETFGWSARLASIRQLMPCIILIAFITWIMMAG
YSTATEAAAYGVVASLALAWAGGSLTRKAFWESLMSATRLTAMIMFVLGATSFLSVTMSFTGIPRALAEWVAALHLSPWA
LIAVLTIIYILLGTALDGISMIALTTATVLPMVQAAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQSMTGKDSNYIAR
VSLPFFMMMVLAIGIITVWPSVVTWLPDVVMAKELK
>Mature_435_residues
STVLVALILLLVMIAFLAIGAWIPVAIAVTSWVGLVIFSDHDALVNLANSWWSSSASYTLASLPLFVWMGEILFRTKLSE
QMFNGLSPWLNWLPGRLMHVNILGCGIFGSVSGSSAATCATIAKSALPELTRRGYDERITLGSLSTAGTLGILIPPSITM
VVYAVSADVSIIRVFLAGFLPGLLLMILFSGYIVVWALMNPEKTPAAETFGWSARLASIRQLMPCIILIAFITWIMMAGY
STATEAAAYGVVASLALAWAGGSLTRKAFWESLMSATRLTAMIMFVLGATSFLSVTMSFTGIPRALAEWVAALHLSPWAL
IAVLTIIYILLGTALDGISMIALTTATVLPMVQAAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQSMTGKDSNYIARV
SLPFFMMMVLAIGIITVWPSVVTWLPDVVMAKELK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=405, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46951; Mature: 46820

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVLVALILLLVMIAFLAIGAWIPVAIAVTSWVGLVIFSDHDALVNLANSWWSSSASYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCHH
LASLPLFVWMGEILFRTKLSEQMFNGLSPWLNWLPGRLMHVNILGCGIFGSVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHH
ATIAKSALPELTRRGYDERITLGSLSTAGTLGILIPPSITMVVYAVSADVSIIRVFLAGF
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHHEEEEHHCCHHHHHHHHHHH
LPGLLLMILFSGYIVVWALMNPEKTPAAETFGWSARLASIRQLMPCIILIAFITWIMMAG
HHHHHHHHHHHHHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YSTATEAAAYGVVASLALAWAGGSLTRKAFWESLMSATRLTAMIMFVLGATSFLSVTMSF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGIPRALAEWVAALHLSPWALIAVLTIIYILLGTALDGISMIALTTATVLPMVQAAGFDL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VWFGIFIVLLVEIAEVTPPVGFNLFVLQSMTGKDSNYIARVSLPFFMMMVLAIGIITVWP
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
SVVTWLPDVVMAKELK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STVLVALILLLVMIAFLAIGAWIPVAIAVTSWVGLVIFSDHDALVNLANSWWSSSASYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCHH
LASLPLFVWMGEILFRTKLSEQMFNGLSPWLNWLPGRLMHVNILGCGIFGSVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHH
ATIAKSALPELTRRGYDERITLGSLSTAGTLGILIPPSITMVVYAVSADVSIIRVFLAGF
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHHEEEEHHCCHHHHHHHHHHH
LPGLLLMILFSGYIVVWALMNPEKTPAAETFGWSARLASIRQLMPCIILIAFITWIMMAG
HHHHHHHHHHHHHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YSTATEAAAYGVVASLALAWAGGSLTRKAFWESLMSATRLTAMIMFVLGATSFLSVTMSF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGIPRALAEWVAALHLSPWALIAVLTIIYILLGTALDGISMIALTTATVLPMVQAAGFDL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VWFGIFIVLLVEIAEVTPPVGFNLFVLQSMTGKDSNYIARVSLPFFMMMVLAIGIITVWP
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
SVVTWLPDVVMAKELK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]