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The map label for this gene is uxuR [H]

Identifier: 94310772

GI number: 94310772

Start: 1988632

End: 1989375

Strand: Direct

Name: uxuR [H]

Synonym: Rmet_1834

Alternate gene names: 94310772

Gene position: 1988632-1989375 (Clockwise)

Preceding gene: 94310770

Following gene: 94310773

Centisome position: 50.63

GC content: 67.07

Gene sequence:

>744_bases
ATGTTCCAAAAGATTCCTGCCCGTGCGCTGACCGACAGCGTTGCCGAACAACTGCTCGAGAAGATCGAGGACGGCATGTT
TCCGCGCGGCGCCAAGCTGCCCACCGAGGCCGTGCTCTCCGAGGAGTTCGGCGTGAGCCGTACCGTGATCCGCGAGGCCA
TCGCGCGACTCAAGTACGAAGGCCTCGTGGAATCGCGCCAGGGTAGCGGCGTGTTCGTGACCGAGCAGGCCGGCATCCGC
CCGCTGCGCATCGACTACACCGACGTGGGCACGCTCGAGTCGGTGCTGCAGATCGTCGAACTGCGACGCTCGATCGAAGC
CGAAGTGGCCGCGCAGGCCGCCCGGCGCCGTACCGACGCGACCATGGCCAATATCGATGCCGCGCTGGCACGCATCGACG
CCGAAGTGGCCGCTGGCGGCGATGGCGTCGATGCTGACGTCGGCTTTCATCGCGCCATCGCCGAAGCCACCGGCAATCCG
TATTTCCTCAAGACACTGGCATTCCTGAGCCAGTACCTGGAAACGGCCACCCGCGTCACGCGAACCAACGAAGCGCGGCG
CGAGGATTTTTCGCGCCAGGTTCGGGAGGAGCACCAGGCCATTGTCGCCGCCATCCGCGCCGGCGACCCCGATGCCGCGC
GCAACGCGGCCCAGAACCACATGTACAACGCGGCGCGCCGGCTCTCCCAACTGGGCGAGGACGATTCCGCCGCTGGCCAC
CAGCCGGCAGGCCCGTCGCACTAA

Upstream 100 bases:

>100_bases
GCGATTATCGGCCATGTGACGCACCACCATAGGGATTACCCTCCTGCCATCCTTCCGTGACATTTGTATGATGACCTGAC
TACCCGATGACGTGATGACG

Downstream 100 bases:

>100_bases
CGCAGCAATACGCACCAAAACGCACCAAAACGCACCAAACACGCATTCAGGAGTTATCCATGTCCAGGAATATTGGCGTC
ATCGGCTTGGGCGCGATGGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFQKIPARALTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYEGLVESRQGSGVFVTEQAGIR
PLRIDYTDVGTLESVLQIVELRRSIEAEVAAQAARRRTDATMANIDAALARIDAEVAAGGDGVDADVGFHRAIAEATGNP
YFLKTLAFLSQYLETATRVTRTNEARREDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRLSQLGEDDSAAGH
QPAGPSH

Sequences:

>Translated_247_residues
MFQKIPARALTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYEGLVESRQGSGVFVTEQAGIR
PLRIDYTDVGTLESVLQIVELRRSIEAEVAAQAARRRTDATMANIDAALARIDAEVAAGGDGVDADVGFHRAIAEATGNP
YFLKTLAFLSQYLETATRVTRTNEARREDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRLSQLGEDDSAAGH
QPAGPSH
>Mature_247_residues
MFQKIPARALTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYEGLVESRQGSGVFVTEQAGIR
PLRIDYTDVGTLESVLQIVELRRSIEAEVAAQAARRRTDATMANIDAALARIDAEVAAGGDGVDADVGFHRAIAEATGNP
YFLKTLAFLSQYLETATRVTRTNEARREDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRLSQLGEDDSAAGH
QPAGPSH

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=238, Percent_Identity=34.0336134453782, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI48994955, Length=233, Percent_Identity=30.9012875536481, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790780, Length=209, Percent_Identity=29.1866028708134, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789621, Length=235, Percent_Identity=29.7872340425532, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1786303, Length=227, Percent_Identity=32.15859030837, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87082208, Length=241, Percent_Identity=31.1203319502075, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI48994961, Length=224, Percent_Identity=31.6964285714286, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789353, Length=244, Percent_Identity=26.6393442622951, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26871; Mature: 26871

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKIPARALTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
GLVESRQGSGVFVTEQAGIRPLRIDYTDVGTLESVLQIVELRRSIEAEVAAQAARRRTDA
HHHHCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMANIDAALARIDAEVAAGGDGVDADVGFHRAIAEATGNPYFLKTLAFLSQYLETATRVT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RTNEARREDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRLSQLGEDDSAAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QPAGPSH
CCCCCCC
>Mature Secondary Structure
MFQKIPARALTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
GLVESRQGSGVFVTEQAGIRPLRIDYTDVGTLESVLQIVELRRSIEAEVAAQAARRRTDA
HHHHCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMANIDAALARIDAEVAAGGDGVDADVGFHRAIAEATGNPYFLKTLAFLSQYLETATRVT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RTNEARREDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRLSQLGEDDSAAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QPAGPSH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]