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The map label for this gene is yidJ [C]

Identifier: 94310740

GI number: 94310740

Start: 1954251

End: 1955807

Strand: Direct

Name: yidJ [C]

Synonym: Rmet_1802

Alternate gene names: 94310740

Gene position: 1954251-1955807 (Clockwise)

Preceding gene: 94310739

Following gene: 94310741

Centisome position: 49.75

GC content: 66.09

Gene sequence:

>1557_bases
ATGTCAGTCCGTAACGTCCTGTTCATCATGTGCGACCAGCTACGCCGCGACCATCTCGGCTGCTACGGTCATCCCACGCT
GCGCACACGCAATATCGACGCACTGGCCGCGCGCGGCGTGCGTTTCGACAACGCCTTTGTCACGTCCGGCGTCTGCGGCC
CCAGCCGCATGAGCTTCTATACCGGGCGCTACGTCAGCAGCCACGGGGCCACCTGGAACCGCGTGCCGCTCTCGATCGGC
GAAATCACACTGGGCGAGTACCTGAAGGATGGCGGTCTGGCGCTGGCCCTGGCGGGAAAGACCCACGTGATGCCAGACAG
CGCCAACCTGAAGCGCCTGCATCTGGATGGCGGCGCGGAACTGGAAACGCTGCTGCGCAGCGGGCACTTCGTCGAAGTGG
ACCGGCACGACGGCCACCACGCCGAACCGCGCAGCCCCTACGCGGACTGGCTGCGCGCGCAAGGCTACGACAGCGCCGAT
CCGTGGACCGACTATGTCATCAGCGCCCAGACGCCGGATGGCGAGGTGGTATCGGGCTGGCACATGCGCAACGCAGGGTT
GCCCGCCCGCGTGGCCGAGCCCCATTCCGAAACGGCCTATACCGTCGATCGCGCGATGGACTACATCGGCGCGCGGGGCG
ATGACCCGTGGGTGCTGCACCTGTCGCTGGTCAAGCCGCATTGGCCGTACATCGCCCCGGCCCCTTACCACGCGGCCTAC
TCGCTCGATGACTGCCTCCCGCTCAACCGGGACGATGTCGAACTCGAGCATCCCCATCCGGTGCTCGACGCGTACCGGAC
CCAGGAGGAATGCGCCAACTTCATGCGCAAGGAGGTGTCGGATACGGTTCGGCCGGCCTACCAGGGCCTGATCCAGCAGA
TCGACGACCGCCTTGGCCAACTCTGGGAACTACTCGAACGCACCGGCCGCTGGCAGGACACGCTGATCGTCTTCACCGCC
GATCACGGGGATTTCCTCGGCGATCACTGGCTGGGCGAGAAGGAGCAGTTCTACGACACCGTGCAGAACGTCCCGCTGAT
TGTCTACGACCCGTCAGCCCAGGCCGATGCCACCCGGGGCACGGCCGACGCCCGCATGGTGTCCGCCGTGGACGTGGTGC
CGACCGTGCTCGACAGCCTCGGCATGCCGGTCTTCGATCACCGCGTGGAAGGCCGATCGCTGCTGGACCTCACGCGCGCC
CGCACCGATGTCTGGCGTGGCTTCGTGGTTTCCGAACTCGACTACGGCTATCGCGGCGCGCGCGTGGCGCTGGGCCGGCA
TCCCGGCGAGTGCCGCGCCTGGATGGTGCGCGATACGCGCTGGAAGTACGTCCACTGGCAGGGATTCCGCCCCCAATTGT
TCGATCTGCTGAACGATCCGAACGAAATTCACGACCTCGGCGAGGACCCCGGGCACGAATCGGTCCGGGCTCAGATGCGC
GGCAACCTGCTCGACTGGTTTTGCACGCTGAAGCCCCGCGTGACCGTCACCAACGAGGAAGTGGCGGCCAAGACCAACGT
CTACAAACAGGCTGGCGTGTTCTTCGGCGTATGGTGA

Upstream 100 bases:

>100_bases
CGACGCCACTCGCTGGGGTCCGGTGGTCAAAGCGTCGGGCTACGTCGGCGACTGAAGACGACCGGCGACGGCGAACCCAA
TCCGTATCAGAGCAACAAAC

Downstream 100 bases:

>100_bases
ATCGGCCACACGGCGCGGGTCAGGAAATGACCCCGCGCCGTGCATCGGCTTGCAAATCGGCGTATTCTGGCAAACTTGTC
ATTCGCGCGTGGCAGGCGTA

Product: sulfatase

Products: NA

Alternate protein names: Cys-type sulfatase [H]

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MSVRNVLFIMCDQLRRDHLGCYGHPTLRTRNIDALAARGVRFDNAFVTSGVCGPSRMSFYTGRYVSSHGATWNRVPLSIG
EITLGEYLKDGGLALALAGKTHVMPDSANLKRLHLDGGAELETLLRSGHFVEVDRHDGHHAEPRSPYADWLRAQGYDSAD
PWTDYVISAQTPDGEVVSGWHMRNAGLPARVAEPHSETAYTVDRAMDYIGARGDDPWVLHLSLVKPHWPYIAPAPYHAAY
SLDDCLPLNRDDVELEHPHPVLDAYRTQEECANFMRKEVSDTVRPAYQGLIQQIDDRLGQLWELLERTGRWQDTLIVFTA
DHGDFLGDHWLGEKEQFYDTVQNVPLIVYDPSAQADATRGTADARMVSAVDVVPTVLDSLGMPVFDHRVEGRSLLDLTRA
RTDVWRGFVVSELDYGYRGARVALGRHPGECRAWMVRDTRWKYVHWQGFRPQLFDLLNDPNEIHDLGEDPGHESVRAQMR
GNLLDWFCTLKPRVTVTNEEVAAKTNVYKQAGVFFGVW

Sequences:

>Translated_518_residues
MSVRNVLFIMCDQLRRDHLGCYGHPTLRTRNIDALAARGVRFDNAFVTSGVCGPSRMSFYTGRYVSSHGATWNRVPLSIG
EITLGEYLKDGGLALALAGKTHVMPDSANLKRLHLDGGAELETLLRSGHFVEVDRHDGHHAEPRSPYADWLRAQGYDSAD
PWTDYVISAQTPDGEVVSGWHMRNAGLPARVAEPHSETAYTVDRAMDYIGARGDDPWVLHLSLVKPHWPYIAPAPYHAAY
SLDDCLPLNRDDVELEHPHPVLDAYRTQEECANFMRKEVSDTVRPAYQGLIQQIDDRLGQLWELLERTGRWQDTLIVFTA
DHGDFLGDHWLGEKEQFYDTVQNVPLIVYDPSAQADATRGTADARMVSAVDVVPTVLDSLGMPVFDHRVEGRSLLDLTRA
RTDVWRGFVVSELDYGYRGARVALGRHPGECRAWMVRDTRWKYVHWQGFRPQLFDLLNDPNEIHDLGEDPGHESVRAQMR
GNLLDWFCTLKPRVTVTNEEVAAKTNVYKQAGVFFGVW
>Mature_517_residues
SVRNVLFIMCDQLRRDHLGCYGHPTLRTRNIDALAARGVRFDNAFVTSGVCGPSRMSFYTGRYVSSHGATWNRVPLSIGE
ITLGEYLKDGGLALALAGKTHVMPDSANLKRLHLDGGAELETLLRSGHFVEVDRHDGHHAEPRSPYADWLRAQGYDSADP
WTDYVISAQTPDGEVVSGWHMRNAGLPARVAEPHSETAYTVDRAMDYIGARGDDPWVLHLSLVKPHWPYIAPAPYHAAYS
LDDCLPLNRDDVELEHPHPVLDAYRTQEECANFMRKEVSDTVRPAYQGLIQQIDDRLGQLWELLERTGRWQDTLIVFTAD
HGDFLGDHWLGEKEQFYDTVQNVPLIVYDPSAQADATRGTADARMVSAVDVVPTVLDSLGMPVFDHRVEGRSLLDLTRAR
TDVWRGFVVSELDYGYRGARVALGRHPGECRAWMVRDTRWKYVHWQGFRPQLFDLLNDPNEIHDLGEDPGHESVRAQMRG
NLLDWFCTLKPRVTVTNEEVAAKTNVYKQAGVFFGVW

Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI39930577, Length=497, Percent_Identity=23.1388329979879, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI53831991, Length=110, Percent_Identity=41.8181818181818, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI31742482, Length=109, Percent_Identity=41.2844036697248, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI146229331, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI146229329, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI6005990, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI146229324, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI157266309, Length=110, Percent_Identity=40, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4504061, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI71852584, Length=109, Percent_Identity=40.3669724770642, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI71852586, Length=109, Percent_Identity=40.3669724770642, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1790112, Length=508, Percent_Identity=27.5590551181102, Blast_Score=136, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17559078, Length=113, Percent_Identity=35.3982300884956, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: =3.1.6.1 [H]

Molecular weight: Translated: 58528; Mature: 58397

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRNVLFIMCDQLRRDHLGCYGHPTLRTRNIDALAARGVRFDNAFVTSGVCGPSRMSFY
CCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHCCCEECCCEEECCCCCCCHHHEE
TGRYVSSHGATWNRVPLSIGEITLGEYLKDGGLALALAGKTHVMPDSANLKRLHLDGGAE
ECCEECCCCCCCCCCCCEECCEEHHHHHCCCCEEEEECCCEEECCCCCCCEEEEECCCHH
LETLLRSGHFVEVDRHDGHHAEPRSPYADWLRAQGYDSADPWTDYVISAQTPDGEVVSGW
HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEECE
HMRNAGLPARVAEPHSETAYTVDRAMDYIGARGDDPWVLHLSLVKPHWPYIAPAPYHAAY
EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SLDDCLPLNRDDVELEHPHPVLDAYRTQEECANFMRKEVSDTVRPAYQGLIQQIDDRLGQ
CHHHCCCCCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWELLERTGRWQDTLIVFTADHGDFLGDHWLGEKEQFYDTVQNVPLIVYDPSAQADATRG
HHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC
TADARMVSAVDVVPTVLDSLGMPVFDHRVEGRSLLDLTRARTDVWRGFVVSELDYGYRGA
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RVALGRHPGECRAWMVRDTRWKYVHWQGFRPQLFDLLNDPNEIHDLGEDPGHESVRAQMR
EEEECCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHC
GNLLDWFCTLKPRVTVTNEEVAAKTNVYKQAGVFFGVW
CCCEEEEEECCCEEEECCHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure 
SVRNVLFIMCDQLRRDHLGCYGHPTLRTRNIDALAARGVRFDNAFVTSGVCGPSRMSFY
CHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHCCCEECCCEEECCCCCCCHHHEE
TGRYVSSHGATWNRVPLSIGEITLGEYLKDGGLALALAGKTHVMPDSANLKRLHLDGGAE
ECCEECCCCCCCCCCCCEECCEEHHHHHCCCCEEEEECCCEEECCCCCCCEEEEECCCHH
LETLLRSGHFVEVDRHDGHHAEPRSPYADWLRAQGYDSADPWTDYVISAQTPDGEVVSGW
HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEECE
HMRNAGLPARVAEPHSETAYTVDRAMDYIGARGDDPWVLHLSLVKPHWPYIAPAPYHAAY
EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SLDDCLPLNRDDVELEHPHPVLDAYRTQEECANFMRKEVSDTVRPAYQGLIQQIDDRLGQ
CHHHCCCCCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWELLERTGRWQDTLIVFTADHGDFLGDHWLGEKEQFYDTVQNVPLIVYDPSAQADATRG
HHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC
TADARMVSAVDVVPTVLDSLGMPVFDHRVEGRSLLDLTRARTDVWRGFVVSELDYGYRGA
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RVALGRHPGECRAWMVRDTRWKYVHWQGFRPQLFDLLNDPNEIHDLGEDPGHESVRAQMR
EEEECCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHC
GNLLDWFCTLKPRVTVTNEEVAAKTNVYKQAGVFFGVW
CCCEEEEEECCCEEEECCHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA