| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is bug
Identifier: 94310693
GI number: 94310693
Start: 1904452
End: 1905450
Strand: Reverse
Name: bug
Synonym: Rmet_1755
Alternate gene names: NA
Gene position: 1905450-1904452 (Counterclockwise)
Preceding gene: 94310694
Following gene: 94310692
Centisome position: 48.51
GC content: 64.56
Gene sequence:
>999_bases ATGACCAAGCTGCTAATCAGCCGCCGCCAGGTACTGAAGGCCGGCGCTGCCGCGTCGATGGCCGCCGTGATGCCCTCGGT GCTGGCCAAGACCGGCTGGCCCGACAAGTTCATCAAGATGGTGGTCGCATTCCCTGCCGGTGGCCCCACCGATACCGCCG CGCGCATCGTGGCGCAGAAGCTGTCGGGACGGCTCGGCCAGCAGGTCATCATCGAAAACAAGCCCGGCGCATCGGGCTCG ATCGGCACCGCCAGCTTTATCCGCAGCCCCGCCGACGGCTACAACCTGTCGATGTTCGGCATGCCGGCCTTGCTGGCACC GCTGATGTACAAGACCAATGCCTACGATGTGAAGAAGGACTTTCTGTCCGTGGCCACGGTCTACGTACTGCCGATGGCCA TCGTCATCAACCCGGCCGTGGTGCCCCATGTCGAAACGCTGCCTGACCTGATCCGCTTCGCCAAGGCAAGCAAGACGCCG TTGAGCTACACCAGTTCCGGCACCGGCAGCTTCGGCCATCTGGCCATGGAGCAGTTGAAGGACCTAGGCGGTTTCGATGT GCTGCACGTGCCTTACCGTGGTAGCGCGCCCGCCGTGGCAGACCTGCTCGGCGGCCAGGTGGGCATCATGTTCGCCGACG TCGTGGCGGCCCTGCCTCATATCCGCGCGGGCAAGCTCAAGGCCATCGCGCTGAGCTCGCCCAACGCCCGCGTGCTGTTG CCTGGCGTGAAGACCGTGTCGGAGCAGGGCTTCCCGGGTTTCGACTTCGACTCCTGGGGTGGCCTGATCGCGCCACTGGA CACGCCGCAACCCATCGTCGACCGGATCGCCAGCGAAACGCGCGACATCATCGGCAAGGACAAGGAGTTGCAGCAGAAGC TGGTCAGCGCAGGGGCGATTGCATCGTTCCAGGACGGCAAGGAGATGCAGGCGCGCCTCAACAAGGACTACGACCGCTGG AGCGCCATCGTCAAGGCCAAGGGCATCAGTGCAAGCTGA
Upstream 100 bases:
>100_bases TTCAAGGAATTGCTGAAGCTCGACGACAGCGCCATCGCGGATCTGCAATCCAGAGGCGTGATCTGACACCCCGAATTTTC GATCGACAGGAGACAAGACA
Downstream 100 bases:
>100_bases CGCTCGTCAGCGGTGGTTGTTAGCCTCTATGAACGGTTCCACCAATCCGTTGCATTGACCGGTTGAATCCGCAGCATAAA CGGCCATCCGCCGACGCAGC
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQKLSGRLGQQVIIENKPGASGS IGTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKDFLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTP LSYTSSGTGSFGHLAMEQLKDLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLL PGVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAIASFQDGKEMQARLNKDYDRW SAIVKAKGISAS
Sequences:
>Translated_332_residues MTKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQKLSGRLGQQVIIENKPGASGS IGTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKDFLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTP LSYTSSGTGSFGHLAMEQLKDLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLL PGVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAIASFQDGKEMQARLNKDYDRW SAIVKAKGISAS >Mature_331_residues TKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQKLSGRLGQQVIIENKPGASGSI GTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKDFLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTPL SYTSSGTGSFGHLAMEQLKDLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLLP GVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAIASFQDGKEMQARLNKDYDRWS AIVKAKGISAS
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35060; Mature: 34929
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQK CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH LSGRLGQQVIIENKPGASGSIGTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKD HHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEHHCHHHHHHHHHHCCCCHHHHHH FLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTPLSYTSSGTGSFGHLAMEQLK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLL HCCCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEE PGVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAI CCHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH ASFQDGKEMQARLNKDYDRWSAIVKAKGISAS HCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQK CHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH LSGRLGQQVIIENKPGASGSIGTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKD HHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEHHCHHHHHHHHHHCCCCHHHHHH FLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTPLSYTSSGTGSFGHLAMEQLK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLL HCCCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEE PGVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAI CCHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH ASFQDGKEMQARLNKDYDRWSAIVKAKGISAS HCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]