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The map label for this gene is 94310681

Identifier: 94310681

GI number: 94310681

Start: 1889915

End: 1890772

Strand: Direct

Name: 94310681

Synonym: Rmet_1743

Alternate gene names: NA

Gene position: 1889915-1890772 (Clockwise)

Preceding gene: 94310680

Following gene: 94310684

Centisome position: 48.11

GC content: 61.42

Gene sequence:

>858_bases
ATGGATCGGCATGGCATGAAGCATGGATTCTCAGGCGTGGATCGAACAGGAAATGCGGCCGCCGCACCGTACTGTCCGAG
TGCACGGATCACAATGTTCGAGCGCAGTATCGCGATCACGACGCAGGATCTTGTGTCCGGGCCTGTGAGGCGCCCGGCAA
TCAGCGTGCTGCTCTCCCTGGATGACACGCCATTCTCCATTTCAATCAACGACGTGCCAGTGCCCAAAGCGCGGGCGTTC
GTCGTGCGAGAGCTTGCGCCGCGCGCCATCCAGGCCTTGAACTGCCAGCTTCTGAGCCTCAGTCTCGATCCGGGGCATCC
GCTTTTTCTGTCGACACGCAAGGCATTGGGAGACAAGGAGTTCCTTGCGCTTCCAGACGGACCGCTGCGGGCCTGCCGCG
ATCCACTGCGCGGAGAACTACTTGGCGCCGTGCCTCGCCAGCCGGATGACCGGCTCATCGAAGCACTGTTGTCTTCGGCG
CCGGATTTCTCCCTCCATTTGCGGGCGAAATCGGCTTCGCGCCGAGAGCACCTGCTCGCGCAATTCGAATCGCAATGGAC
TGAACCGCATCTCGCGAGCAAGCTGGCGGCAGCGATGGACCTTTCGGTCAGCCGGCTGTCCCATCTTTTCGTGGAAGAGG
TCGGCGTGCCGCTTCGGACCTATACCCTCTGGCGGAAGTACCGACACGCATGCGCCAGGCTGCAGTCTCCTGGCAACCTG
AGCACGCTGGCGCAGGATTGCGGCTTCTCGGACGCCGCGCACATGACACGAACCTTCGTCAGCTACCTGGGCTTCTCACC
AACCATGGTAAAAAGCCTGAGCCATATCCATCGACCAGTCGAAGCACACCGTGCCTGA

Upstream 100 bases:

>100_bases
TGCCTGGCGCCTGGGCGGAGATCCCGGAAGCCACGTTCATGCAAGCCAGACAGGGGACGGTCGACTACTACCCGTTCATC
CCGACGTATTCGGAGCCTTG

Downstream 100 bases:

>100_bases
GGTGGGGCAGCAGGGCGGGTAACCACCGGGAATCACTCGCGATGCAGCGCCCAGGTGAACGTATAGCCCTCCAGATGGAC
CTTCACGGCTTGTTCGATCT

Product: putative Transcriptional regulator, helix-turn-helix, AraC family

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family; Transcriptional Regulator; Arac Family Transcriptional Regulator

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDRHGMKHGFSGVDRTGNAAAAPYCPSARITMFERSIAITTQDLVSGPVRRPAISVLLSLDDTPFSISINDVPVPKARAF
VVRELAPRAIQALNCQLLSLSLDPGHPLFLSTRKALGDKEFLALPDGPLRACRDPLRGELLGAVPRQPDDRLIEALLSSA
PDFSLHLRAKSASRREHLLAQFESQWTEPHLASKLAAAMDLSVSRLSHLFVEEVGVPLRTYTLWRKYRHACARLQSPGNL
STLAQDCGFSDAAHMTRTFVSYLGFSPTMVKSLSHIHRPVEAHRA

Sequences:

>Translated_285_residues
MDRHGMKHGFSGVDRTGNAAAAPYCPSARITMFERSIAITTQDLVSGPVRRPAISVLLSLDDTPFSISINDVPVPKARAF
VVRELAPRAIQALNCQLLSLSLDPGHPLFLSTRKALGDKEFLALPDGPLRACRDPLRGELLGAVPRQPDDRLIEALLSSA
PDFSLHLRAKSASRREHLLAQFESQWTEPHLASKLAAAMDLSVSRLSHLFVEEVGVPLRTYTLWRKYRHACARLQSPGNL
STLAQDCGFSDAAHMTRTFVSYLGFSPTMVKSLSHIHRPVEAHRA
>Mature_285_residues
MDRHGMKHGFSGVDRTGNAAAAPYCPSARITMFERSIAITTQDLVSGPVRRPAISVLLSLDDTPFSISINDVPVPKARAF
VVRELAPRAIQALNCQLLSLSLDPGHPLFLSTRKALGDKEFLALPDGPLRACRDPLRGELLGAVPRQPDDRLIEALLSSA
PDFSLHLRAKSASRREHLLAQFESQWTEPHLASKLAAAMDLSVSRLSHLFVEEVGVPLRTYTLWRKYRHACARLQSPGNL
STLAQDCGFSDAAHMTRTFVSYLGFSPTMVKSLSHIHRPVEAHRA

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31357; Mature: 31357

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRHGMKHGFSGVDRTGNAAAAPYCPSARITMFERSIAITTQDLVSGPVRRPAISVLLSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHEEHHHHHCCCCCCHHHHHEEEC
DDTPFSISINDVPVPKARAFVVRELAPRAIQALNCQLLSLSLDPGHPLFLSTRKALGDKE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEHHHHCCCCC
FLALPDGPLRACRDPLRGELLGAVPRQPDDRLIEALLSSAPDFSLHLRAKSASRREHLLA
EEECCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
QFESQWTEPHLASKLAAAMDLSVSRLSHLFVEEVGVPLRTYTLWRKYRHACARLQSPGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH
STLAQDCGFSDAAHMTRTFVSYLGFSPTMVKSLSHIHRPVEAHRA
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MDRHGMKHGFSGVDRTGNAAAAPYCPSARITMFERSIAITTQDLVSGPVRRPAISVLLSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHEEHHHHHCCCCCCHHHHHEEEC
DDTPFSISINDVPVPKARAFVVRELAPRAIQALNCQLLSLSLDPGHPLFLSTRKALGDKE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEHHHHCCCCC
FLALPDGPLRACRDPLRGELLGAVPRQPDDRLIEALLSSAPDFSLHLRAKSASRREHLLA
EEECCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
QFESQWTEPHLASKLAAAMDLSVSRLSHLFVEEVGVPLRTYTLWRKYRHACARLQSPGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH
STLAQDCGFSDAAHMTRTFVSYLGFSPTMVKSLSHIHRPVEAHRA
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA