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The map label for this gene is cybB [H]

Identifier: 94310674

GI number: 94310674

Start: 1881189

End: 1881746

Strand: Direct

Name: cybB [H]

Synonym: Rmet_1736

Alternate gene names: 94310674

Gene position: 1881189-1881746 (Clockwise)

Preceding gene: 94310670

Following gene: 94310679

Centisome position: 47.89

GC content: 62.37

Gene sequence:

>558_bases
ATGCATTTGACATCCCCACATACCCTCTCCCTGACCTTCCAGCCCAAATACTCCTTAGCCATGCGCGCGTTGCACTGGCT
GGTATTCCTGGGCGCCGTGGTGGCGGTTGCGGCGGTGGAGTTTCGCGACGTGTTCCCGAAGGGCAGCACCGAGCGGGCCG
CGATGATGGCAATTCATGAATCCGCGGGCATCACGATATTGGTGTTGATGCTGTTGCGTCTGCTGGTGCGAGTGAGCCAA
CCGCTCCCTCCGCCGCCGGCCGGGGACCCACGGTGGATGGACCGCGCGGCAAGCGCCATGCATTTCGTGCTGTATGTGCT
GATGCTGGCCATGCCGGTGCTCGGCATGTTGGCGGTGGCGTGGAAGGGCAGGACCATCCCGGTCTATGGCTTCCAGCTGG
CGCTACCGCTCGCGATCAATGAGCCGTACTCAAAGCTCGCGAAGGAGATTCACGAAACTGGCGCCACGTTCGTGTACATC
TTCGTCGGCCTGCACGCCGCAGCCGCCTTGTGGCACCAGTTCGTCCTGAAGGACCGGCTACTTCGCCGGATGATCTAG

Upstream 100 bases:

>100_bases
CTTTGCCGTTGACCTGTCACAAGCTGGGAGCGGTATTGAGGATTGATTCCGGACAGACATGACGCGCAGAATTGTTCTGT
TGGAACAAAAGAGGACAAAA

Downstream 100 bases:

>100_bases
GCTGGCCACCGTCTGCTGCGACCACCCGCCGCCCAGCGCCTTGTATAGGCTTGCGCGGCTGGTGAGTCTGGCCAGTTCGA
TCGTCACCATCTTCTTCTGC

Product: cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MHLTSPHTLSLTFQPKYSLAMRALHWLVFLGAVVAVAAVEFRDVFPKGSTERAAMMAIHESAGITILVLMLLRLLVRVSQ
PLPPPPAGDPRWMDRAASAMHFVLYVLMLAMPVLGMLAVAWKGRTIPVYGFQLALPLAINEPYSKLAKEIHETGATFVYI
FVGLHAAAALWHQFVLKDRLLRRMI

Sequences:

>Translated_185_residues
MHLTSPHTLSLTFQPKYSLAMRALHWLVFLGAVVAVAAVEFRDVFPKGSTERAAMMAIHESAGITILVLMLLRLLVRVSQ
PLPPPPAGDPRWMDRAASAMHFVLYVLMLAMPVLGMLAVAWKGRTIPVYGFQLALPLAINEPYSKLAKEIHETGATFVYI
FVGLHAAAALWHQFVLKDRLLRRMI
>Mature_185_residues
MHLTSPHTLSLTFQPKYSLAMRALHWLVFLGAVVAVAAVEFRDVFPKGSTERAAMMAIHESAGITILVLMLLRLLVRVSQ
PLPPPPAGDPRWMDRAASAMHFVLYVLMLAMPVLGMLAVAWKGRTIPVYGFQLALPLAINEPYSKLAKEIHETGATFVYI
FVGLHAAAALWHQFVLKDRLLRRMI

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI87082013, Length=174, Percent_Identity=39.6551724137931, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI87081903, Length=174, Percent_Identity=40.2298850574713, Blast_Score=73, Evalue=9e-15,
Organism=Escherichia coli, GI1787296, Length=183, Percent_Identity=31.1475409836066, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20610; Mature: 20610

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLTSPHTLSLTFQPKYSLAMRALHWLVFLGAVVAVAAVEFRDVFPKGSTERAAMMAIHE
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SAGITILVLMLLRLLVRVSQPLPPPPAGDPRWMDRAASAMHFVLYVLMLAMPVLGMLAVA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKGRTIPVYGFQLALPLAINEPYSKLAKEIHETGATFVYIFVGLHAAAALWHQFVLKDRL
HCCCEEEEEHHHEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRRMI
HHHCC
>Mature Secondary Structure
MHLTSPHTLSLTFQPKYSLAMRALHWLVFLGAVVAVAAVEFRDVFPKGSTERAAMMAIHE
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SAGITILVLMLLRLLVRVSQPLPPPPAGDPRWMDRAASAMHFVLYVLMLAMPVLGMLAVA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKGRTIPVYGFQLALPLAINEPYSKLAKEIHETGATFVYIFVGLHAAAALWHQFVLKDRL
HCCCEEEEEHHHEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRRMI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]