| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94310647
Identifier: 94310647
GI number: 94310647
Start: 1849368
End: 1850186
Strand: Reverse
Name: 94310647
Synonym: Rmet_1707
Alternate gene names: NA
Gene position: 1850186-1849368 (Counterclockwise)
Preceding gene: 94310654
Following gene: 335055546
Centisome position: 47.1
GC content: 60.32
Gene sequence:
>819_bases ATGGTAAAGGACTCGCGCCGTACTGACGAGGATTCTGCAATGCAGCAAGACCTTGACTCGAAGACGTACGAGAAGGCGCT GCGCTCGCTGCACGTCGAACTAGTGCACCTGCAGGACTGGGTCAAGGCTACTGGTGCCAAGGTATGCGTCATCTTCGAAG GGCGTGACGGCGCCGGCAAGGGCGGCGTCATCAAGGCCATCACCGAGCGGGTCAGCCCCCGCGTCTTTCGGGTGATCGCC CTGCCCGCTCCCACTGATCGCGAAAAGAGCCAGATGTACGTGCAACGGTACATCCCGCATCTTCCCGCAGCCGGCGAAAT CGTGATCTTCGACCGTAGCTGGTACAACCGCGCCGGCGTCGAACGCGTGATGAAATTCTGCGACGAGGAACAGGTTGAGT TGTTCCTGCGCGCCGTGCCGCTGGTGGAACGCGCCATCGTCGGCTCGAACATTCAGCTCATCAAGTACTGGCTCGAAGTC AGCCCCGAAGAACAGACACGCCGCCTTGAGCAGCGCATTCTGGATGGCCGCAAGACGTGGAAGTTGACGGATATGGACCT GAAGTCATACAGCCGCTGGTATGACTACTCGCGTGCGCGGGACGCGATGTTCGAGGCATCGGATACCGACTTCGCGCCGT GGAATGTCGTACGATCGGATTGCAAGCGACGCGCCCGGCTCAACATCATCAGCCATCTGCTTGCTTCGGTTCCCTACGAG CCCATCCCGCGCAAGAAGGTTACGCTCCCGGACCGGCAGAAGCGCGGCTCCTACAAGGAGCCCGACTACCCCTATCGGTA CATCCCGGAGAAATTCTGA
Upstream 100 bases:
>100_bases AGCCAAGCATTGGACCAAAGTCCCTTGCCAAGGTCATGCCCGTATCCGAGATTGATACTTGAGGCAATGGGGCCTGCTGC AAGCGCCGGGAGAAACACTT
Downstream 100 bases:
>100_bases GTTCCGGGCGCAAACCGCATCTTCAGGGGCCGCGTTATTGCGGCCCCTGAAGTTTGCGGCATCGGATCTTCAATCCTTCA ATCTTTCAGTAGCGTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MVKDSRRTDEDSAMQQDLDSKTYEKALRSLHVELVHLQDWVKATGAKVCVIFEGRDGAGKGGVIKAITERVSPRVFRVIA LPAPTDREKSQMYVQRYIPHLPAAGEIVIFDRSWYNRAGVERVMKFCDEEQVELFLRAVPLVERAIVGSNIQLIKYWLEV SPEEQTRRLEQRILDGRKTWKLTDMDLKSYSRWYDYSRARDAMFEASDTDFAPWNVVRSDCKRRARLNIISHLLASVPYE PIPRKKVTLPDRQKRGSYKEPDYPYRYIPEKF
Sequences:
>Translated_272_residues MVKDSRRTDEDSAMQQDLDSKTYEKALRSLHVELVHLQDWVKATGAKVCVIFEGRDGAGKGGVIKAITERVSPRVFRVIA LPAPTDREKSQMYVQRYIPHLPAAGEIVIFDRSWYNRAGVERVMKFCDEEQVELFLRAVPLVERAIVGSNIQLIKYWLEV SPEEQTRRLEQRILDGRKTWKLTDMDLKSYSRWYDYSRARDAMFEASDTDFAPWNVVRSDCKRRARLNIISHLLASVPYE PIPRKKVTLPDRQKRGSYKEPDYPYRYIPEKF >Mature_272_residues MVKDSRRTDEDSAMQQDLDSKTYEKALRSLHVELVHLQDWVKATGAKVCVIFEGRDGAGKGGVIKAITERVSPRVFRVIA LPAPTDREKSQMYVQRYIPHLPAAGEIVIFDRSWYNRAGVERVMKFCDEEQVELFLRAVPLVERAIVGSNIQLIKYWLEV SPEEQTRRLEQRILDGRKTWKLTDMDLKSYSRWYDYSRARDAMFEASDTDFAPWNVVRSDCKRRARLNIISHLLASVPYE PIPRKKVTLPDRQKRGSYKEPDYPYRYIPEKF
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31833; Mature: 31833
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKDSRRTDEDSAMQQDLDSKTYEKALRSLHVELVHLQDWVKATGAKVCVIFEGRDGAGK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GGVIKAITERVSPRVFRVIALPAPTDREKSQMYVQRYIPHLPAAGEIVIFDRSWYNRAGV CCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH ERVMKFCDEEQVELFLRAVPLVERAIVGSNIQLIKYWLEVSPEEQTRRLEQRILDGRKTW HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE KLTDMDLKSYSRWYDYSRARDAMFEASDTDFAPWNVVRSDCKRRARLNIISHLLASVPYE EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIPRKKVTLPDRQKRGSYKEPDYPYRYIPEKF CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKDSRRTDEDSAMQQDLDSKTYEKALRSLHVELVHLQDWVKATGAKVCVIFEGRDGAGK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GGVIKAITERVSPRVFRVIALPAPTDREKSQMYVQRYIPHLPAAGEIVIFDRSWYNRAGV CCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH ERVMKFCDEEQVELFLRAVPLVERAIVGSNIQLIKYWLEVSPEEQTRRLEQRILDGRKTW HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE KLTDMDLKSYSRWYDYSRARDAMFEASDTDFAPWNVVRSDCKRRARLNIISHLLASVPYE EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIPRKKVTLPDRQKRGSYKEPDYPYRYIPEKF CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA