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The map label for this gene is yhhJ [H]

Identifier: 94310623

GI number: 94310623

Start: 1820560

End: 1821753

Strand: Reverse

Name: yhhJ [H]

Synonym: Rmet_1683

Alternate gene names: 94310623

Gene position: 1821753-1820560 (Counterclockwise)

Preceding gene: 94310624

Following gene: 94310621

Centisome position: 46.38

GC content: 63.4

Gene sequence:

>1194_bases
ATGGACGCCGCGCCCAACGCCTCCACCCCTGCAGCCACTCCCGCTCGCGCCGATGCACGACGCGGCACGCTGCGCCATCT
GGCGAACATCTACCGGCTCGGCGTCAAGGAGCTCTGGAGCCTGGCGCGTGACCCGATCATGCTGGTGCTGATCATCTACA
CGTTCACGGCTTCGGTGTACACGGCCGCCACGGCCCAGCCCGATACGCTGCACATGGCGCCGATCGCCATCGTTGACGAA
GACCATTCGCCGCTGTCGCAACAGATCGCTTCCGCCCTCTTCCCGCCGCAGTTCACCATGCCGCAAATGATCACGTCGTC
GGAAGTCAACGCAGGCATGGATGCTGGCAACTACACGTTCGCGCTCAATATCCCCCCGAATTTCCAGCGGGATGTCCTGG
GCGGACGCTTCGCCGAGATTCAGCTCAACGTCGACGCCACGCGCATGAGCCAGGCATTTACTGGCAGCGGTTACGTTCAG
CAGATCGTCTCGGGCGAAATCCAGACGTTCGTGGACCGCTACCGCTCCACCACCCGGCTGCCCGTGGAACTGGCGCTGCG
TGTGCGCTTCAACCCAACGCTGACACTGGCATGGTTCGGCGCGCTGAACCAGATCATCAACAACATCACCATGCTGTCGA
TCATCCTGACTGGCGCCGCGTTGATCCGCGAGCGTGAGCACGGCACGATCGAACACCTGCTGGTCATGCCCGTCACGCCG
TCGGAAATCATGCTCAGCAAGGTCTGGTCTATGGGGCTGGTGGTGCTGGTCGCCGCCGCCATGTCACTGATGTTGATCGT
GCGTGGCGCCCTGCACGTGCCGATCGCCGGGTCGGAAACGCTCTTCCTGTGCGGCGCCGCGCTGCTCCTGTTCGCCACCA
CCTCGATGGGCATCTTCATGGCCACGCTGGCGCGCTCGATGCCGCAGTTCGGCATGCTGCTCGTGCTCGTGCTGATGCCG
CTGCAGATGTTGTCCGGCGGGAATACGCCACGCGAAAGCATGCCGGAGATTGTCCAGTACATCATGCTGGCGGCGCCCAC
CACCCACTTCGTGGAACTCAGCCAGGCGATCCTGTTCCGTGGTGCGGGCCTTGAGGTCGTGTGGGTGCAGTTCGTCGCGC
TGTTCGTGATCGGGGCGGCGTTTTTCGTGATATCGCTGCGGCGCTTCCGCAAGACGATCAGCCAGATGGCGTAA

Upstream 100 bases:

>100_bases
TTGGTTTCTCCGACCTTCACGCTTCGTACTGGCCGATGCTGATCGCCATCCCCGTCATTCTCGGGTTGACGGTGGCGCTG
CTGGCCAAGCAGGACAAATG

Downstream 100 bases:

>100_bases
AGGAGGGAGCCGTCCGATGGACGGCGTTCCGTCTACCGCCGATCTCGAACTCGACACCTCCGCGAGGCCGGCAACGCCGA
TAGCCCCTACTCCGCCGCGG

Product: putative ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MDAAPNASTPAATPARADARRGTLRHLANIYRLGVKELWSLARDPIMLVLIIYTFTASVYTAATAQPDTLHMAPIAIVDE
DHSPLSQQIASALFPPQFTMPQMITSSEVNAGMDAGNYTFALNIPPNFQRDVLGGRFAEIQLNVDATRMSQAFTGSGYVQ
QIVSGEIQTFVDRYRSTTRLPVELALRVRFNPTLTLAWFGALNQIINNITMLSIILTGAALIREREHGTIEHLLVMPVTP
SEIMLSKVWSMGLVVLVAAAMSLMLIVRGALHVPIAGSETLFLCGAALLLFATTSMGIFMATLARSMPQFGMLLVLVLMP
LQMLSGGNTPRESMPEIVQYIMLAAPTTHFVELSQAILFRGAGLEVVWVQFVALFVIGAAFFVISLRRFRKTISQMA

Sequences:

>Translated_397_residues
MDAAPNASTPAATPARADARRGTLRHLANIYRLGVKELWSLARDPIMLVLIIYTFTASVYTAATAQPDTLHMAPIAIVDE
DHSPLSQQIASALFPPQFTMPQMITSSEVNAGMDAGNYTFALNIPPNFQRDVLGGRFAEIQLNVDATRMSQAFTGSGYVQ
QIVSGEIQTFVDRYRSTTRLPVELALRVRFNPTLTLAWFGALNQIINNITMLSIILTGAALIREREHGTIEHLLVMPVTP
SEIMLSKVWSMGLVVLVAAAMSLMLIVRGALHVPIAGSETLFLCGAALLLFATTSMGIFMATLARSMPQFGMLLVLVLMP
LQMLSGGNTPRESMPEIVQYIMLAAPTTHFVELSQAILFRGAGLEVVWVQFVALFVIGAAFFVISLRRFRKTISQMA
>Mature_397_residues
MDAAPNASTPAATPARADARRGTLRHLANIYRLGVKELWSLARDPIMLVLIIYTFTASVYTAATAQPDTLHMAPIAIVDE
DHSPLSQQIASALFPPQFTMPQMITSSEVNAGMDAGNYTFALNIPPNFQRDVLGGRFAEIQLNVDATRMSQAFTGSGYVQ
QIVSGEIQTFVDRYRSTTRLPVELALRVRFNPTLTLAWFGALNQIINNITMLSIILTGAALIREREHGTIEHLLVMPVTP
SEIMLSKVWSMGLVVLVAAAMSLMLIVRGALHVPIAGSETLFLCGAALLLFATTSMGIFMATLARSMPQFGMLLVLVLMP
LQMLSGGNTPRESMPEIVQYIMLAAPTTHFVELSQAILFRGAGLEVVWVQFVALFVIGAAFFVISLRRFRKTISQMA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=64.7058823529412, Blast_Score=486, Evalue=1e-138,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=28.7262872628726, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI48994943, Length=395, Percent_Identity=25.5696202531646, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787011, Length=265, Percent_Identity=28.6792452830189, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43373; Mature: 43373

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAPNASTPAATPARADARRGTLRHLANIYRLGVKELWSLARDPIMLVLIIYTFTASVY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAATAQPDTLHMAPIAIVDEDHSPLSQQIASALFPPQFTMPQMITSSEVNAGMDAGNYTF
HHCCCCCCCEEECEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEE
ALNIPPNFQRDVLGGRFAEIQLNVDATRMSQAFTGSGYVQQIVSGEIQTFVDRYRSTTRL
EEECCCCCCHHHCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PVELALRVRFNPTLTLAWFGALNQIINNITMLSIILTGAALIREREHGTIEHLLVMPVTP
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCH
SEIMLSKVWSMGLVVLVAAAMSLMLIVRGALHVPIAGSETLFLCGAALLLFATTSMGIFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATLARSMPQFGMLLVLVLMPLQMLSGGNTPRESMPEIVQYIMLAAPTTHFVELSQAILFR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GAGLEVVWVQFVALFVIGAAFFVISLRRFRKTISQMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAAPNASTPAATPARADARRGTLRHLANIYRLGVKELWSLARDPIMLVLIIYTFTASVY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAATAQPDTLHMAPIAIVDEDHSPLSQQIASALFPPQFTMPQMITSSEVNAGMDAGNYTF
HHCCCCCCCEEECEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEE
ALNIPPNFQRDVLGGRFAEIQLNVDATRMSQAFTGSGYVQQIVSGEIQTFVDRYRSTTRL
EEECCCCCCHHHCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PVELALRVRFNPTLTLAWFGALNQIINNITMLSIILTGAALIREREHGTIEHLLVMPVTP
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCH
SEIMLSKVWSMGLVVLVAAAMSLMLIVRGALHVPIAGSETLFLCGAALLLFATTSMGIFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATLARSMPQFGMLLVLVLMPLQMLSGGNTPRESMPEIVQYIMLAAPTTHFVELSQAILFR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GAGLEVVWVQFVALFVIGAAFFVISLRRFRKTISQMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]