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The map label for this gene is omp32 [H]

Identifier: 94310581

GI number: 94310581

Start: 1771127

End: 1772230

Strand: Reverse

Name: omp32 [H]

Synonym: Rmet_1639

Alternate gene names: 94310581

Gene position: 1772230-1771127 (Counterclockwise)

Preceding gene: 94310582

Following gene: 94310579

Centisome position: 45.12

GC content: 65.31

Gene sequence:

>1104_bases
ATGAAGACCCGTATAACCTGCCTGGCCGCGCTGGCCATTCTGCCCACCCTGCCCGCCACGGCCCACGCCGACGGCAGCAT
TACGCTCTATGGCGTCGTCGATGCCGGCGTGGAATACCTGACCCACGTACCGAACACCGCCGGCGGTAGCAACAGCGTTG
TCCGCCTGTCGGCCGGCAACCTGTCGACCTCGCGTTGGGGCCTGCGTGGCAGCGAGGATCTTGGTGGTGGCCTGAAAGCC
ATCTTCACGCTGGAGAACGGTTTCGACCTGGACACCGGCAACGCCAACCAGGCCGGCCGGCTGTTCGGCCGCCAGGCATT
CGTGGGCCTGCAGAACCAGTACGGATCGCTGACGCTGGGTCGTCATCAGACCGTACTCTATGACTTCTCGCTCACGTATG
ACCCGATGGCCATCGCCACGCGCTACTCGGTGCTGATGCACGACAAGTGGATGTCGGGCCGGGCCGACAACTCGCTGAAG
CTGACCGGCAAGCTTGGCGCGGTCTACTACGGGCTGTTCTACAGCACCGGCTACGACAGCAAGGCCGGTGGCGAGATTCC
GGGCGACTACAAGGCTGGCCGCAACTGGTCGGCCGCGGCCGGCTACGATGCGGGACCGCTGTCGGCGCGCGTGGTCTACG
ACGAAGTGCGCGGCAGCACCGTTGCTACCGATGACAATCGCGAGCGCCGCGCCAGCATCGGCGCCAGCTACAACTTCGGC
CGAGGTCGGGCTTTTGCCGGCTACCGCTGGTACTACGGCGATTTCGCCACCAGCTCGCTGCGCACCAACCTGTACTGGCT
TGGCGCGAGCTACCAGGTGACGCCTGCGGTCACCGTGACCGGCGCAGCCTACTACACCGACGTGCGCAACAGCAGCGGCG
ATCCGTACAGCTTCGTGCTTTCGGGTACCTATGCGTTCTCGAAGCGTACGGACCTCTACGCCATTGCCGCCTACGCCCAG
AACAGCAACGGATCGGCTATGGGACTTTCCGGCTTCGGCCCGTCGCTGAACGCCAACGCGACCACGCTGACGGCCGCCAC
CGAACAGGTCGGTGCGGGCCAGAACCAGTTCGGCGCGATCATCGGCATCCGCCATCGCTTCTGA

Upstream 100 bases:

>100_bases
CTCTTCTTTGCTTCGTCTCCTCTCGTTACATTCCTGACGCCGCACCGCGCCCGAGCCCGCAAGGAGGCGTGCGTGCGTCT
GATAACAAGGATCACGAAGC

Downstream 100 bases:

>100_bases
TCGGCAAGCACATACCAGACACGCTCCACGACGGAGGTTTCCTTCGTCATTGCAGGCCCGCCTTGGCGGGCCTTTTTTGC
GTCTGGCCGAATGCCCTTCC

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKTRITCLAALAILPTLPATAHADGSITLYGVVDAGVEYLTHVPNTAGGSNSVVRLSAGNLSTSRWGLRGSEDLGGGLKA
IFTLENGFDLDTGNANQAGRLFGRQAFVGLQNQYGSLTLGRHQTVLYDFSLTYDPMAIATRYSVLMHDKWMSGRADNSLK
LTGKLGAVYYGLFYSTGYDSKAGGEIPGDYKAGRNWSAAAGYDAGPLSARVVYDEVRGSTVATDDNRERRASIGASYNFG
RGRAFAGYRWYYGDFATSSLRTNLYWLGASYQVTPAVTVTGAAYYTDVRNSSGDPYSFVLSGTYAFSKRTDLYAIAAYAQ
NSNGSAMGLSGFGPSLNANATTLTAATEQVGAGQNQFGAIIGIRHRF

Sequences:

>Translated_367_residues
MKTRITCLAALAILPTLPATAHADGSITLYGVVDAGVEYLTHVPNTAGGSNSVVRLSAGNLSTSRWGLRGSEDLGGGLKA
IFTLENGFDLDTGNANQAGRLFGRQAFVGLQNQYGSLTLGRHQTVLYDFSLTYDPMAIATRYSVLMHDKWMSGRADNSLK
LTGKLGAVYYGLFYSTGYDSKAGGEIPGDYKAGRNWSAAAGYDAGPLSARVVYDEVRGSTVATDDNRERRASIGASYNFG
RGRAFAGYRWYYGDFATSSLRTNLYWLGASYQVTPAVTVTGAAYYTDVRNSSGDPYSFVLSGTYAFSKRTDLYAIAAYAQ
NSNGSAMGLSGFGPSLNANATTLTAATEQVGAGQNQFGAIIGIRHRF
>Mature_367_residues
MKTRITCLAALAILPTLPATAHADGSITLYGVVDAGVEYLTHVPNTAGGSNSVVRLSAGNLSTSRWGLRGSEDLGGGLKA
IFTLENGFDLDTGNANQAGRLFGRQAFVGLQNQYGSLTLGRHQTVLYDFSLTYDPMAIATRYSVLMHDKWMSGRADNSLK
LTGKLGAVYYGLFYSTGYDSKAGGEIPGDYKAGRNWSAAAGYDAGPLSARVVYDEVRGSTVATDDNRERRASIGASYNFG
RGRAFAGYRWYYGDFATSSLRTNLYWLGASYQVTPAVTVTGAAYYTDVRNSSGDPYSFVLSGTYAFSKRTDLYAIAAYAQ
NSNGSAMGLSGFGPSLNANATTLTAATEQVGAGQNQFGAIIGIRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39097; Mature: 39097

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRITCLAALAILPTLPATAHADGSITLYGVVDAGVEYLTHVPNTAGGSNSVVRLSAGN
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCC
LSTSRWGLRGSEDLGGGLKAIFTLENGFDLDTGNANQAGRLFGRQAFVGLQNQYGSLTLG
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCEEEC
RHQTVLYDFSLTYDPMAIATRYSVLMHDKWMSGRADNSLKLTGKLGAVYYGLFYSTGYDS
CCEEEEEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCCCC
KAGGEIPGDYKAGRNWSAAAGYDAGPLSARVVYDEVRGSTVATDDNRERRASIGASYNFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEECCCCCHHHHHCCCCCCCC
RGRAFAGYRWYYGDFATSSLRTNLYWLGASYQVTPAVTVTGAAYYTDVRNSSGDPYSFVL
CCCEEEEEEEEECCCCCCCCCCEEEEECCCEEECCEEEEECEEEEEECCCCCCCCEEEEE
SGTYAFSKRTDLYAIAAYAQNSNGSAMGLSGFGPSLNANATTLTAATEQVGAGQNQFGAI
EEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCEEEEECHHHHCCCCCCCEEE
IGIRHRF
EEEEECC
>Mature Secondary Structure
MKTRITCLAALAILPTLPATAHADGSITLYGVVDAGVEYLTHVPNTAGGSNSVVRLSAGN
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCC
LSTSRWGLRGSEDLGGGLKAIFTLENGFDLDTGNANQAGRLFGRQAFVGLQNQYGSLTLG
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCEEEC
RHQTVLYDFSLTYDPMAIATRYSVLMHDKWMSGRADNSLKLTGKLGAVYYGLFYSTGYDS
CCEEEEEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCCCC
KAGGEIPGDYKAGRNWSAAAGYDAGPLSARVVYDEVRGSTVATDDNRERRASIGASYNFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEECCCCCHHHHHCCCCCCCC
RGRAFAGYRWYYGDFATSSLRTNLYWLGASYQVTPAVTVTGAAYYTDVRNSSGDPYSFVL
CCCEEEEEEEEECCCCCCCCCCEEEEECCCEEECCEEEEECEEEEEECCCCCCCCEEEEE
SGTYAFSKRTDLYAIAAYAQNSNGSAMGLSGFGPSLNANATTLTAATEQVGAGQNQFGAI
EEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCEEEEECHHHHCCCCCCCEEE
IGIRHRF
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]