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The map label for this gene is amaB-1 [H]

Identifier: 94310564

GI number: 94310564

Start: 1749459

End: 1750715

Strand: Direct

Name: amaB-1 [H]

Synonym: Rmet_1622

Alternate gene names: 94310564

Gene position: 1749459-1750715 (Clockwise)

Preceding gene: 94310563

Following gene: 94310565

Centisome position: 44.54

GC content: 67.7

Gene sequence:

>1257_bases
ATGACGACTTTGAACATCGACGGCCAGCGGCTCTGGCAGTCCCTGATGGATCTGGCTGCCATCGGCGCGACGCCAAAGGG
CGGCAACGCGCGGCTGGCACTGACCGCGCTGGACGGACAGGGGCGCGATCTCGTGACAGGCTGGATGCGCGATGCCGGCC
TGACGGTGACCGTGGACCAGGTGGGCAACATCTTTGGCCGTCGCGCGGGCCGCAACAATGACCTGCCGCCTGTCATGACC
GGCAGCCACATCGACACGCAGCCCACCGGCGGCAAGTTCGACGGGTGCTTTGGCGTGCTGGCGGGTCTGGAGGTGATGCG
CACGCTCAACGACCACGGCGTGCAGACGGAGGCGCCGCTGGAACTTGCCATCTGGACCAACGAGGAAGGCACGCGTTTCG
TGCCCGTGATGATGGGCTCGGGCGTGTTCGCTGGCGTGTTCCCGCTGGAAGTGGCCCTGAACGCCACGGATACGGCGGGC
AAGCGCGTGGCGGACGAACTGGAGGCGATCGGCTATGCCGGCAAGCTGCCGGTTGGCGGGCGACCCGTGGGCGCGTACTT
CGAGGCCCACATCGAGCAGGGTCCGATCCTGGAGGCTGCCGACAACGTGATCGGCGTGGTCACAGGCTCGCTGGGGCTGC
GTTGGTATGACGTGACCGTGACCGGCATGGAGGCTCACGCAGGCCCCACGCCGATGCCGCTGCGGCGCGATGCGCTCTAC
GGCGCCACGCACGTGATGCAGGAGGTGATCCGTATCGCCAACGATTTCGCGCCGCATGGGCGCGGTACGGTGGGCGTGGT
CAACGTTCACCCCGCCTCGCGCAATGTGATTCCCGGTGCGGTGACGTTCACGGTGGACCTGCGTCACCAGGACGCGGAGC
AACTCAAGGTGATGGATGCGCGTTTCCGCGCGGCCTGCGCGGCGCTGGCCGAAGGCAAGACCACGGGAACGGCGCTCGAC
GTGAAGATCGAGGACGTGCAGTACTTCGCGCCCACGCCGTTCGCGCCGGAGCTGGTTGGCCACGTCCGGGCAGAGGCGCA
GGCACGCGGCTTCAGCCATCAGGACATCGTGACGGGCGCGGGTCACGACGCGGTGTATATCGCCGGCGTGGCGCCGACCG
CGATGATCTTCGTGCCGTGCAAGGACGGCATCAGCCACAACGAGGTGGAAGACGCCCGGCCCGAGCATCTGGAGGCTGGC
GCAAACGTATTGCTTGGCGCCATGGTGGCGCAGGCGGGCAAGGGGCGTGACCAATGA

Upstream 100 bases:

>100_bases
GTGGTGCAGGAGGGCGGTTACGAAGTGGATGCGATCGGTATCGCGCTGGAAGCATTTCTCGCGGGCTTCGTGCCTGCGAT
GGCATGAATCAGGAGTACAC

Downstream 100 bases:

>100_bases
GCGAACTCAAGGATCTCGAATACTGGCGGGGCCGGGCGCGGGCGCTGCCGATTCCGGCACACGCTTATATCGACGGCCAG
TGGACCAGCGCGGCCGATGG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTTLNIDGQRLWQSLMDLAAIGATPKGGNARLALTALDGQGRDLVTGWMRDAGLTVTVDQVGNIFGRRAGRNNDLPPVMT
GSHIDTQPTGGKFDGCFGVLAGLEVMRTLNDHGVQTEAPLELAIWTNEEGTRFVPVMMGSGVFAGVFPLEVALNATDTAG
KRVADELEAIGYAGKLPVGGRPVGAYFEAHIEQGPILEAADNVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALY
GATHVMQEVIRIANDFAPHGRGTVGVVNVHPASRNVIPGAVTFTVDLRHQDAEQLKVMDARFRAACAALAEGKTTGTALD
VKIEDVQYFAPTPFAPELVGHVRAEAQARGFSHQDIVTGAGHDAVYIAGVAPTAMIFVPCKDGISHNEVEDARPEHLEAG
ANVLLGAMVAQAGKGRDQ

Sequences:

>Translated_418_residues
MTTLNIDGQRLWQSLMDLAAIGATPKGGNARLALTALDGQGRDLVTGWMRDAGLTVTVDQVGNIFGRRAGRNNDLPPVMT
GSHIDTQPTGGKFDGCFGVLAGLEVMRTLNDHGVQTEAPLELAIWTNEEGTRFVPVMMGSGVFAGVFPLEVALNATDTAG
KRVADELEAIGYAGKLPVGGRPVGAYFEAHIEQGPILEAADNVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALY
GATHVMQEVIRIANDFAPHGRGTVGVVNVHPASRNVIPGAVTFTVDLRHQDAEQLKVMDARFRAACAALAEGKTTGTALD
VKIEDVQYFAPTPFAPELVGHVRAEAQARGFSHQDIVTGAGHDAVYIAGVAPTAMIFVPCKDGISHNEVEDARPEHLEAG
ANVLLGAMVAQAGKGRDQ
>Mature_417_residues
TTLNIDGQRLWQSLMDLAAIGATPKGGNARLALTALDGQGRDLVTGWMRDAGLTVTVDQVGNIFGRRAGRNNDLPPVMTG
SHIDTQPTGGKFDGCFGVLAGLEVMRTLNDHGVQTEAPLELAIWTNEEGTRFVPVMMGSGVFAGVFPLEVALNATDTAGK
RVADELEAIGYAGKLPVGGRPVGAYFEAHIEQGPILEAADNVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALYG
ATHVMQEVIRIANDFAPHGRGTVGVVNVHPASRNVIPGAVTFTVDLRHQDAEQLKVMDARFRAACAALAEGKTTGTALDV
KIEDVQYFAPTPFAPELVGHVRAEAQARGFSHQDIVTGAGHDAVYIAGVAPTAMIFVPCKDGISHNEVEDARPEHLEAGA
NVLLGAMVAQAGKGRDQ

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=401, Percent_Identity=33.6658354114713, Blast_Score=200, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44091; Mature: 43959

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLNIDGQRLWQSLMDLAAIGATPKGGNARLALTALDGQGRDLVTGWMRDAGLTVTVDQ
CEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEHHH
VGNIFGRRAGRNNDLPPVMTGSHIDTQPTGGKFDGCFGVLAGLEVMRTLNDHGVQTEAPL
HHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
ELAIWTNEEGTRFVPVMMGSGVFAGVFPLEVALNATDTAGKRVADELEAIGYAGKLPVGG
EEEEEECCCCCEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
RPVGAYFEAHIEQGPILEAADNVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALY
CCCCHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH
GATHVMQEVIRIANDFAPHGRGTVGVVNVHPASRNVIPGAVTFTVDLRHQDAEQLKVMDA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
RFRAACAALAEGKTTGTALDVKIEDVQYFAPTPFAPELVGHVRAEAQARGFSHQDIVTGA
HHHHHHHHHHCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECC
GHDAVYIAGVAPTAMIFVPCKDGISHNEVEDARPEHLEAGANVLLGAMVAQAGKGRDQ
CCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTLNIDGQRLWQSLMDLAAIGATPKGGNARLALTALDGQGRDLVTGWMRDAGLTVTVDQ
EEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEHHH
VGNIFGRRAGRNNDLPPVMTGSHIDTQPTGGKFDGCFGVLAGLEVMRTLNDHGVQTEAPL
HHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
ELAIWTNEEGTRFVPVMMGSGVFAGVFPLEVALNATDTAGKRVADELEAIGYAGKLPVGG
EEEEEECCCCCEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
RPVGAYFEAHIEQGPILEAADNVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALY
CCCCHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH
GATHVMQEVIRIANDFAPHGRGTVGVVNVHPASRNVIPGAVTFTVDLRHQDAEQLKVMDA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
RFRAACAALAEGKTTGTALDVKIEDVQYFAPTPFAPELVGHVRAEAQARGFSHQDIVTGA
HHHHHHHHHHCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECC
GHDAVYIAGVAPTAMIFVPCKDGISHNEVEDARPEHLEAGANVLLGAMVAQAGKGRDQ
CCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]