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The map label for this gene is cbbS [H]

Identifier: 94310442

GI number: 94310442

Start: 1620012

End: 1620368

Strand: Reverse

Name: cbbS [H]

Synonym: Rmet_1500

Alternate gene names: 94310442

Gene position: 1620368-1620012 (Counterclockwise)

Preceding gene: 94310443

Following gene: 94310441

Centisome position: 41.25

GC content: 57.7

Gene sequence:

>357_bases
ATGTCTGACGTAATGGATTACAACTCCCGCCTTTCCGACCCCGCCAGCCGGAAGTTCGAAACTTTTTCCTACCTGCCCGC
GATGGACGCGGCCAGCATCAAGAGGCAGGTCGAGTATCTGGTGAAGAAGGGCTGGAACCCGGCTATCGAGCATATCGAGC
CTGAGTACCTGATGGACTCCTACTGGTACATGTGGAAGTTGCCGATGTTCGGTGAAACCGACGTCGATCGCGTTCTGGCC
GAGGCCAAAGCCTGCCACAAGGCCAACCCCAACAACCACGTGCGCCTGGTCGGCTACGACAACTTCAAGCAGTCGCAAGG
CGCGGCCATGGTGGTTTACCGCGGCAAGACGGTTTAA

Upstream 100 bases:

>100_bases
AGCTGGACGTCGCCCACAAGTAATTCTTGCGCCGAGCGCATGACACCCCGGAGCCGCAATTGGCGACCCGGGATCAGGAC
CCAATTTGAAAGGAAATGAA

Downstream 100 bases:

>100_bases
GTCGCTCGGCGGTTGGCAGTATCTGGCCCCCGCTGCGCGGCAAGCGCAATCGGGGGCTTTTTGTTTTCCAGGAGTTTGCC
AACGAATGGTGCGCCGTCGA

Product: ribulose 1,5-bisphosphate carboxylase/oxygenase, RuBisCO (type I) small subunit (CbbS)

Products: NA

Alternate protein names: RuBisCO small subunit [H]

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSDVMDYNSRLSDPASRKFETFSYLPAMDAASIKRQVEYLVKKGWNPAIEHIEPEYLMDSYWYMWKLPMFGETDVDRVLA
EAKACHKANPNNHVRLVGYDNFKQSQGAAMVVYRGKTV

Sequences:

>Translated_118_residues
MSDVMDYNSRLSDPASRKFETFSYLPAMDAASIKRQVEYLVKKGWNPAIEHIEPEYLMDSYWYMWKLPMFGETDVDRVLA
EAKACHKANPNNHVRLVGYDNFKQSQGAAMVVYRGKTV
>Mature_117_residues
SDVMDYNSRLSDPASRKFETFSYLPAMDAASIKRQVEYLVKKGWNPAIEHIEPEYLMDSYWYMWKLPMFGETDVDRVLAE
AKACHKANPNNHVRLVGYDNFKQSQGAAMVVYRGKTV

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000894 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 13661; Mature: 13530

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVMDYNSRLSDPASRKFETFSYLPAMDAASIKRQVEYLVKKGWNPAIEHIEPEYLMDS
CCCCCCCHHHCCCCCHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHC
YWYMWKLPMFGETDVDRVLAEAKACHKANPNNHVRLVGYDNFKQSQGAAMVVYRGKTV
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SDVMDYNSRLSDPASRKFETFSYLPAMDAASIKRQVEYLVKKGWNPAIEHIEPEYLMDS
CCCCCCHHHCCCCCHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHC
YWYMWKLPMFGETDVDRVLAEAKACHKANPNNHVRLVGYDNFKQSQGAAMVVYRGKTV
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550452 [H]