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The map label for this gene is cbbO [H]

Identifier: 94310440

GI number: 94310440

Start: 1616689

End: 1619046

Strand: Reverse

Name: cbbO [H]

Synonym: Rmet_1498

Alternate gene names: 94310440

Gene position: 1619046-1616689 (Counterclockwise)

Preceding gene: 94310441

Following gene: 94310439

Centisome position: 41.22

GC content: 60.01

Gene sequence:

>2358_bases
ATGTCATTCAATCTTGCTGATTATGCCGAATTGCTGGAGGACTTGTCGCCGCACAGCCAGAATGCGTTGCAGGCCAATTG
GCACGAAGCGACCAAGGTGTTCTCGCCGCGTGGTCTGGACAACTACCTGAAGGGTGCGGCCGCCATTCGCGGACTCGGCA
AGGGTGATTCGCTGGTGGAAACCTGGATCGAGAAAGCGCCGATGGTCGCCAAGGAGGTCGGCGAGGACGTTGTCGGCGAC
CTGGCTACTGCCTCCCTCGAACTGGCCTCGCGAACCTCGGGGACGGTGATCGAGCTGCTGCTCGCCACTTCGGCCATCGC
CGCCAATCGGCTGGGTGATGCCGAACTTTTCATCAAGTACCTGCAGTTCATCAATACCCTGATCGCGCAAGCGCCGCGTG
GCGTGCGGCCGATGCTGGACAAGCTGGAAGTCCTGTTCCAGCACCTCACCCTCGGTGGCCTGCGCCGTTGGGCGCTCTGG
GGCGCCCATGCACACCGCACCAACTACGAAGAACAGATCCGCTATTTCAGCCTTGATTCCAAGGAGTCGATGGCGATGCT
GCAGAAGGAGCGCAAGGGCACCCTGCTGGTAGATGTGCAGCGCCGCATCAACATGTATCTGCGCGCACTGTGGGCCCGCG
ACTTCTTCATGCGCCCCACGTCAGGCGACTTCGAGACCCGCGAAGGCTACCGCCCTTACATCGAGGACTACCTGCTGCAC
GTGCCGGATGCGTTCGACGATTTCACGGTCGAAGGTCAGGAGCCAGTGTCCGGTCTGGAGCTATATCGCGCCACGGCCGC
CCATTGCGCCGCCCACGTGGTCGAGACGAAGCTGCCTATTTCCGCCGAGGCGCTCAATCCCATGCAGATCGCGGTGATCA
GCGTCATCGAGGATGCGCGCGTGGAGACTCTCTCCATCCGGCGCTTTCCCGGCCTCAAGCAACTCTGGAGCAAGCTGCAC
ACGGCCACGCCCGAGATGAATGGCAGCATGGGCGATTATCTCAACCGTCTTGCACGCGCCCTGCTTGATGAGTCATACAA
GGACAAGGACCCGTGGATCGTCGAGGCCCGTGCGCTGTTCGCGCTCGCGCAGGAGAAGCTCGATAGCAACCTGACTTCAT
GGGATATTGGCGTCCAGCTTGCGCACAGCTTCGGCCAGAAACGGATTCCGTTCAATCCACGTACCGATTTGCTCACCGCC
CCCTACCGCGACGACAACCGCTACTTCTGGGAGTTCGAGGAATTCGATTTCAACAAGGCAGCCAGTGCCGGCTACGAGTC
CATCAAACAGGTGCGCAAGTACGTCAGCGTGATGGAAATGGCCAACGAGATCGATGTCGAGACGGCCGGCGACGATGCCG
AGGAAATCTGGGTGCTCGGCACCGAGTTGTTCCCGTATGAAAACATCGGTGACGAGAGTGGCGGCAAGAGCTTCAACGAA
CTTGAAGGCAAGGAGCCGGTCTCCGACCCCTTCCATTATTCCGAATGGGATTACCAGATCCAGTTGGAGCGCCCGGCCTG
GGCAACCGTGCTGGAAAAGCGTGCCAAGGCCGGCGACCTGCAGATCATCGAGGCGATTACCGCACAGTACAAGCGCGAAA
TCCATCGCATGAAATTCCTGCTCGACGCCATGCAGCCGCAGGGTGTGCAGCGCATCCGCCGCCTCGAGGACGGCGACGAG
ATCGACATCAACGCAGCGATCTCCAGCCTTACCGACATCCGCCTCGGCAACCAGCCCGATCCACGCATCATGATGCGTAG
TGTGCGCAAGACCCGCGACTTTTCGATCCTGGTGTTGCTCGATCTGTCGGAATCGACCAACGAAAAAGTGCAGGACCAGG
AATATTCGGTGCGCGAGCTCACCCAGCAGGCCTGCGTGCTGCTGGCCGACGCCATAAACAAGGTCGGCGACCCCTTTGCC
ATCCACGGCTTTTGTTCGGACGGACGCCACGATGTCGAGTACTACCGGTTCAAGGACTTCGACCAGCATTGGGACGAGAC
ACCCAAGTCCCGGCTCGCCGGGATGACCGGGCAGCTGTCTACCCGGATGGGTGCAGCGATTCGACATGCCGGCCATCATT
TGCAACTGCAGCGTTCGGCCAAGAAACTCCTGATCGTCATTACCGACGGCGAACCCGCCGACGTGGATGTGCGCGACCCG
CAATACTTGCGCTACGACACCAAGAAGGCTGTGGAGGAGGTGGCAAAACTTGGTGTCACCACCTACTGCATGAGCCTGGA
CCCACGCGCTGATAATTACGTCTCACGAATTTTTGGCCAGAAGAACTACATGGTGGTGGATCATGTCCAGCGCCTGCCCG
AGAAACTGCCGCTGCTGTATGCCGGCCTTACCCGATAG

Upstream 100 bases:

>100_bases
CGCCTGCCGCGTCGCGCTGGTCCGCCCGATCACCGACGATCCCGACATGCGCGATGCGCTCGATGCTGCGGTAACCACCT
TCTTCTAAAGGCAGCCTGCC

Downstream 100 bases:

>100_bases
GAAAGACCATGGAAAACACATACCCCGGTTTATACAGCGACAAGCACGGCCTCACCCAACTCGGCCGCATCGTCCTCGAC
GGCTGGTTGTTCGGCCTGAT

Product: Rubisco activation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 785; Mature: 784

Protein sequence:

>785_residues
MSFNLADYAELLEDLSPHSQNALQANWHEATKVFSPRGLDNYLKGAAAIRGLGKGDSLVETWIEKAPMVAKEVGEDVVGD
LATASLELASRTSGTVIELLLATSAIAANRLGDAELFIKYLQFINTLIAQAPRGVRPMLDKLEVLFQHLTLGGLRRWALW
GAHAHRTNYEEQIRYFSLDSKESMAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFETREGYRPYIEDYLLH
VPDAFDDFTVEGQEPVSGLELYRATAAHCAAHVVETKLPISAEALNPMQIAVISVIEDARVETLSIRRFPGLKQLWSKLH
TATPEMNGSMGDYLNRLARALLDESYKDKDPWIVEARALFALAQEKLDSNLTSWDIGVQLAHSFGQKRIPFNPRTDLLTA
PYRDDNRYFWEFEEFDFNKAASAGYESIKQVRKYVSVMEMANEIDVETAGDDAEEIWVLGTELFPYENIGDESGGKSFNE
LEGKEPVSDPFHYSEWDYQIQLERPAWATVLEKRAKAGDLQIIEAITAQYKREIHRMKFLLDAMQPQGVQRIRRLEDGDE
IDINAAISSLTDIRLGNQPDPRIMMRSVRKTRDFSILVLLDLSESTNEKVQDQEYSVRELTQQACVLLADAINKVGDPFA
IHGFCSDGRHDVEYYRFKDFDQHWDETPKSRLAGMTGQLSTRMGAAIRHAGHHLQLQRSAKKLLIVITDGEPADVDVRDP
QYLRYDTKKAVEEVAKLGVTTYCMSLDPRADNYVSRIFGQKNYMVVDHVQRLPEKLPLLYAGLTR

Sequences:

>Translated_785_residues
MSFNLADYAELLEDLSPHSQNALQANWHEATKVFSPRGLDNYLKGAAAIRGLGKGDSLVETWIEKAPMVAKEVGEDVVGD
LATASLELASRTSGTVIELLLATSAIAANRLGDAELFIKYLQFINTLIAQAPRGVRPMLDKLEVLFQHLTLGGLRRWALW
GAHAHRTNYEEQIRYFSLDSKESMAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFETREGYRPYIEDYLLH
VPDAFDDFTVEGQEPVSGLELYRATAAHCAAHVVETKLPISAEALNPMQIAVISVIEDARVETLSIRRFPGLKQLWSKLH
TATPEMNGSMGDYLNRLARALLDESYKDKDPWIVEARALFALAQEKLDSNLTSWDIGVQLAHSFGQKRIPFNPRTDLLTA
PYRDDNRYFWEFEEFDFNKAASAGYESIKQVRKYVSVMEMANEIDVETAGDDAEEIWVLGTELFPYENIGDESGGKSFNE
LEGKEPVSDPFHYSEWDYQIQLERPAWATVLEKRAKAGDLQIIEAITAQYKREIHRMKFLLDAMQPQGVQRIRRLEDGDE
IDINAAISSLTDIRLGNQPDPRIMMRSVRKTRDFSILVLLDLSESTNEKVQDQEYSVRELTQQACVLLADAINKVGDPFA
IHGFCSDGRHDVEYYRFKDFDQHWDETPKSRLAGMTGQLSTRMGAAIRHAGHHLQLQRSAKKLLIVITDGEPADVDVRDP
QYLRYDTKKAVEEVAKLGVTTYCMSLDPRADNYVSRIFGQKNYMVVDHVQRLPEKLPLLYAGLTR
>Mature_784_residues
SFNLADYAELLEDLSPHSQNALQANWHEATKVFSPRGLDNYLKGAAAIRGLGKGDSLVETWIEKAPMVAKEVGEDVVGDL
ATASLELASRTSGTVIELLLATSAIAANRLGDAELFIKYLQFINTLIAQAPRGVRPMLDKLEVLFQHLTLGGLRRWALWG
AHAHRTNYEEQIRYFSLDSKESMAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFETREGYRPYIEDYLLHV
PDAFDDFTVEGQEPVSGLELYRATAAHCAAHVVETKLPISAEALNPMQIAVISVIEDARVETLSIRRFPGLKQLWSKLHT
ATPEMNGSMGDYLNRLARALLDESYKDKDPWIVEARALFALAQEKLDSNLTSWDIGVQLAHSFGQKRIPFNPRTDLLTAP
YRDDNRYFWEFEEFDFNKAASAGYESIKQVRKYVSVMEMANEIDVETAGDDAEEIWVLGTELFPYENIGDESGGKSFNEL
EGKEPVSDPFHYSEWDYQIQLERPAWATVLEKRAKAGDLQIIEAITAQYKREIHRMKFLLDAMQPQGVQRIRRLEDGDEI
DINAAISSLTDIRLGNQPDPRIMMRSVRKTRDFSILVLLDLSESTNEKVQDQEYSVRELTQQACVLLADAINKVGDPFAI
HGFCSDGRHDVEYYRFKDFDQHWDETPKSRLAGMTGQLSTRMGAAIRHAGHHLQLQRSAKKLLIVITDGEPADVDVRDPQ
YLRYDTKKAVEEVAKLGVTTYCMSLDPRADNYVSRIFGQKNYMVVDHVQRLPEKLPLLYAGLTR

Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]

COG id: COG4548

COG function: function code P; Nitric oxide reductase activation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 89217; Mature: 89086

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50234 VWFA ; PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNLADYAELLEDLSPHSQNALQANWHEATKVFSPRGLDNYLKGAAAIRGLGKGDSLVE
CCCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH
TWIEKAPMVAKEVGEDVVGDLATASLELASRTSGTVIELLLATSAIAANRLGDAELFIKY
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LQFINTLIAQAPRGVRPMLDKLEVLFQHLTLGGLRRWALWGAHAHRTNYEEQIRYFSLDS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHEECCCC
KESMAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFETREGYRPYIEDYLLH
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
VPDAFDDFTVEGQEPVSGLELYRATAAHCAAHVVETKLPISAEALNPMQIAVISVIEDAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCC
VETLSIRRFPGLKQLWSKLHTATPEMNGSMGDYLNRLARALLDESYKDKDPWIVEARALF
HHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
ALAQEKLDSNLTSWDIGVQLAHSFGQKRIPFNPRTDLLTAPYRDDNRYFWEFEEFDFNKA
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHCCCCHH
ASAGYESIKQVRKYVSVMEMANEIDVETAGDDAEEIWVLGTELFPYENIGDESGGKSFNE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCHHH
LEGKEPVSDPFHYSEWDYQIQLERPAWATVLEKRAKAGDLQIIEAITAQYKREIHRMKFL
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDAMQPQGVQRIRRLEDGDEIDINAAISSLTDIRLGNQPDPRIMMRSVRKTRDFSILVLL
HHHHCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEE
DLSESTNEKVQDQEYSVRELTQQACVLLADAINKVGDPFAIHGFCSDGRHDVEYYRFKDF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCH
DQHWDETPKSRLAGMTGQLSTRMGAAIRHAGHHLQLQRSAKKLLIVITDGEPADVDVRDP
HHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHEECCCCEEEEEEECCCCCCCCCCCC
QYLRYDTKKAVEEVAKLGVTTYCMSLDPRADNYVSRIFGQKNYMVVDHVQRLPEKLPLLY
HHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
AGLTR
HCCCC
>Mature Secondary Structure 
SFNLADYAELLEDLSPHSQNALQANWHEATKVFSPRGLDNYLKGAAAIRGLGKGDSLVE
CCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH
TWIEKAPMVAKEVGEDVVGDLATASLELASRTSGTVIELLLATSAIAANRLGDAELFIKY
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LQFINTLIAQAPRGVRPMLDKLEVLFQHLTLGGLRRWALWGAHAHRTNYEEQIRYFSLDS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHEECCCC
KESMAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFETREGYRPYIEDYLLH
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
VPDAFDDFTVEGQEPVSGLELYRATAAHCAAHVVETKLPISAEALNPMQIAVISVIEDAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCC
VETLSIRRFPGLKQLWSKLHTATPEMNGSMGDYLNRLARALLDESYKDKDPWIVEARALF
HHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
ALAQEKLDSNLTSWDIGVQLAHSFGQKRIPFNPRTDLLTAPYRDDNRYFWEFEEFDFNKA
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHCCCCHH
ASAGYESIKQVRKYVSVMEMANEIDVETAGDDAEEIWVLGTELFPYENIGDESGGKSFNE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCHHH
LEGKEPVSDPFHYSEWDYQIQLERPAWATVLEKRAKAGDLQIIEAITAQYKREIHRMKFL
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDAMQPQGVQRIRRLEDGDEIDINAAISSLTDIRLGNQPDPRIMMRSVRKTRDFSILVLL
HHHHCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEE
DLSESTNEKVQDQEYSVRELTQQACVLLADAINKVGDPFAIHGFCSDGRHDVEYYRFKDF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCH
DQHWDETPKSRLAGMTGQLSTRMGAAIRHAGHHLQLQRSAKKLLIVITDGEPADVDVRDP
HHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHEECCCCEEEEEEECCCCCCCCCCCC
QYLRYDTKKAVEEVAKLGVTTYCMSLDPRADNYVSRIFGQKNYMVVDHVQRLPEKLPLLY
HHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
AGLTR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA