Click here to switch to the map view.

The map label for this gene is 94310409

Identifier: 94310409

GI number: 94310409

Start: 1587331

End: 1587855

Strand: Direct

Name: 94310409

Synonym: Rmet_1467

Alternate gene names: NA

Gene position: 1587331-1587855 (Clockwise)

Preceding gene: 94310408

Following gene: 94310417

Centisome position: 40.41

GC content: 67.81

Gene sequence:

>525_bases
ATGGAATACACCTTCACCCTGAAATACCAGCTTGCCGACGACGACCGCGACACGGAGGCGTTGGTGGAGCGCCTGGGCGA
AGCCGGCTGCGACGATGCCTTGGTCGGCATCGGGCAGCCGGGGCGCCTGGCGCTGGAGTTCACGCGCGAGGCGGCGGATG
CGGATGACGCGGTGCGTAGTGCGCTGGCCGATGTGCGCCGTGCCGCGCCGTCGGCCAAGCTGATCGAGGTGGCGCCGGAT
TTGGTCGGCCTGACCGATGTGGCCGACATCGTGGGCGTGTCGCGGCAGAACATGCGCAAGTTGATGCTGGCCCATCCGGG
CAGCTTCCCGGCGCCGGTGCATGAGGGCAGTGCGTCGATCTGGCATCTGGCGGACGTGCTGGCTTGGTTGCAGGCCAAGG
GCAGTTATGCGCTGGCCAAGGACGTGCTGGAGGTGGCGCGAGTGGCTTTGCAGGTCAACGTGGCGAAGGAGGGGCGGCGG
CTGCCGCGCTCGGCGTCAAAGGAACTGCAAGCCCTGGTCGGATGA

Upstream 100 bases:

>100_bases
AACCCCGGCAACCACGCTCGCGCCTTGCGGCGCGTCGTGGACAACTGCACCACGCACCGCAAGCAGCACGAGGCTGACGA
CGGTTCCAAGGAGTAGCGCG

Downstream 100 bases:

>100_bases
GGAACGTCGCCGGCCTCATTTCTCGCTCGAACCCGCCCGGACAGGGCGGGTTTTTCGTAGGTGGACATCCGGCTTTGAGG
TGCCGCCGCGAGGCGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Transcriptional Regulator AlpA; Transcriptional Regulator

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MEYTFTLKYQLADDDRDTEALVERLGEAGCDDALVGIGQPGRLALEFTREAADADDAVRSALADVRRAAPSAKLIEVAPD
LVGLTDVADIVGVSRQNMRKLMLAHPGSFPAPVHEGSASIWHLADVLAWLQAKGSYALAKDVLEVARVALQVNVAKEGRR
LPRSASKELQALVG

Sequences:

>Translated_174_residues
MEYTFTLKYQLADDDRDTEALVERLGEAGCDDALVGIGQPGRLALEFTREAADADDAVRSALADVRRAAPSAKLIEVAPD
LVGLTDVADIVGVSRQNMRKLMLAHPGSFPAPVHEGSASIWHLADVLAWLQAKGSYALAKDVLEVARVALQVNVAKEGRR
LPRSASKELQALVG
>Mature_174_residues
MEYTFTLKYQLADDDRDTEALVERLGEAGCDDALVGIGQPGRLALEFTREAADADDAVRSALADVRRAAPSAKLIEVAPD
LVGLTDVADIVGVSRQNMRKLMLAHPGSFPAPVHEGSASIWHLADVLAWLQAKGSYALAKDVLEVARVALQVNVAKEGRR
LPRSASKELQALVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18643; Mature: 18643

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTFTLKYQLADDDRDTEALVERLGEAGCDDALVGIGQPGRLALEFTREAADADDAVRS
CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHH
ALADVRRAAPSAKLIEVAPDLVGLTDVADIVGVSRQNMRKLMLAHPGSFPAPVHEGSASI
HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
WHLADVLAWLQAKGSYALAKDVLEVARVALQVNVAKEGRRLPRSASKELQALVG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEYTFTLKYQLADDDRDTEALVERLGEAGCDDALVGIGQPGRLALEFTREAADADDAVRS
CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHH
ALADVRRAAPSAKLIEVAPDLVGLTDVADIVGVSRQNMRKLMLAHPGSFPAPVHEGSASI
HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
WHLADVLAWLQAKGSYALAKDVLEVARVALQVNVAKEGRRLPRSASKELQALVG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA