| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is cysW [H]
Identifier: 94310319
GI number: 94310319
Start: 1486171
End: 1487088
Strand: Direct
Name: cysW [H]
Synonym: Rmet_1377
Alternate gene names: 94310319
Gene position: 1486171-1487088 (Clockwise)
Preceding gene: 94310318
Following gene: 94310320
Centisome position: 37.83
GC content: 64.49
Gene sequence:
>918_bases ATGGCTGGTGCAATTTCCCGTCTGGGTGGCCCAGGTGCCCCAGGCGCCCCAAGTGCCCACGTACAGGCCGCGCAGTTCCC GCACGACGCCACTGGCGAATCACGCTGGGTGCGGTACGGGCTGATCACGGTCGCGGTGCTGTTCCTGGGGCTGTTCCTGT TCATCCCGCTGGCGTCAGTGTTCTATGAGGCGCTGCGCAAGGGTGTCGATACCTATCTGGCTGCATTGACCGAGCCGGAT GCCGTGTCGGCCATCAAGCTGACGCTGACGGTCGCCGCGATCGCGGTGCCGCTCAATGTGGTGTTCGGCGTGGCCGCCGC GTGGGCCATCGCCAAGTTCGATTTCCGCGGCAAGAACCTGCTGATCACGCTGATCGACCTGCCGTTCTCGGTGTCGCCTG TGATCTCCGGCCTGATCTACGTGCTGATGTTCGGCGCGCAGGGTTGGTTCGGACCATGGCTGGAGGCGCACGACATCAAG ATCATGTTCGCCGTGCCCGGGATCGTGCTGGCGACGATCTTCGTGACGTTCCCGTTCGTGGCGCGCGAGCTGATTCCGCT GATGCAGGCGCAGGGCAGCGAGGAGGAAGAGGCTGCCATCGTGCTGGGCGCTTCCGGCTGGCAGACGTTCTGGCACGTGA CGCTGCCGAACATCCGCTGGGGCCTGCTATACGGCGTGATTCTCTGCAACGCGCGGGCGATGGGCGAGTTCGGCGCCGTG TCGGTGGTATCGGGTCATATCCGCGGCCTGACCAACACCATGCCGCTGCACGTCGAGATTCTCTACAACGAATACAACTT CGCGGCCGCGTTCGCGGTGGCGTCCCTGCTGACGCTGCTGGCGCTGGTCACGCTCGGTATCAAGACGCTGGTCGAAATCC GCGCCAGCCGGGAACAACTGGAAGGGCAGCCATCATGA
Upstream 100 bases:
>100_bases CTGCTGTTGCTGATCAACCTGTTGCAAGCCTGGACGCGCCGTCACCAGAGCGGTGTCCGTGCCGCCGCGCTGCCCGATGG CAATCCGGAGGTGAACTGAG
Downstream 100 bases:
>100_bases GCATTCAGGTCAGGAACGTACACAAGCGCTTTGGCGATTTCGTAGCGCTCAACGACGTCTCGCTGGACTTCGCCGAAGGC GAACTCACCGCGCTGCTGGG
Product: sulfate/thiosulfate ABC transporter membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAGAISRLGGPGAPGAPSAHVQAAQFPHDATGESRWVRYGLITVAVLFLGLFLFIPLASVFYEALRKGVDTYLAALTEPD AVSAIKLTLTVAAIAVPLNVVFGVAAAWAIAKFDFRGKNLLITLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLEAHDIK IMFAVPGIVLATIFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFWHVTLPNIRWGLLYGVILCNARAMGEFGAV SVVSGHIRGLTNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLGIKTLVEIRASREQLEGQPS
Sequences:
>Translated_305_residues MAGAISRLGGPGAPGAPSAHVQAAQFPHDATGESRWVRYGLITVAVLFLGLFLFIPLASVFYEALRKGVDTYLAALTEPD AVSAIKLTLTVAAIAVPLNVVFGVAAAWAIAKFDFRGKNLLITLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLEAHDIK IMFAVPGIVLATIFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFWHVTLPNIRWGLLYGVILCNARAMGEFGAV SVVSGHIRGLTNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLGIKTLVEIRASREQLEGQPS >Mature_304_residues AGAISRLGGPGAPGAPSAHVQAAQFPHDATGESRWVRYGLITVAVLFLGLFLFIPLASVFYEALRKGVDTYLAALTEPDA VSAIKLTLTVAAIAVPLNVVFGVAAAWAIAKFDFRGKNLLITLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLEAHDIKI MFAVPGIVLATIFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFWHVTLPNIRWGLLYGVILCNARAMGEFGAVS VVSGHIRGLTNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLGIKTLVEIRASREQLEGQPS
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=52.0446096654275, Blast_Score=295, Evalue=2e-81, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=38.8349514563107, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1786980, Length=226, Percent_Identity=31.858407079646, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787369, Length=235, Percent_Identity=30.2127659574468, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32693; Mature: 32562
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAISRLGGPGAPGAPSAHVQAAQFPHDATGESRWVRYGLITVAVLFLGLFLFIPLASV CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FYEALRKGVDTYLAALTEPDAVSAIKLTLTVAAIAVPLNVVFGVAAAWAIAKFDFRGKNL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LITLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLEAHDIKIMFAVPGIVLATIFVTFPFV EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH ARELIPLMQAQGSEEEEAAIVLGASGWQTFWHVTLPNIRWGLLYGVILCNARAMGEFGAV HHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCH SVVSGHIRGLTNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLGIKTLVEIRASREQL HHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EGQPS CCCCC >Mature Secondary Structure AGAISRLGGPGAPGAPSAHVQAAQFPHDATGESRWVRYGLITVAVLFLGLFLFIPLASV CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FYEALRKGVDTYLAALTEPDAVSAIKLTLTVAAIAVPLNVVFGVAAAWAIAKFDFRGKNL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LITLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLEAHDIKIMFAVPGIVLATIFVTFPFV EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH ARELIPLMQAQGSEEEEAAIVLGASGWQTFWHVTLPNIRWGLLYGVILCNARAMGEFGAV HHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCH SVVSGHIRGLTNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLGIKTLVEIRASREQL HHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EGQPS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]