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The map label for this gene is trbI [H]

Identifier: 94310292

GI number: 94310292

Start: 1459093

End: 1460364

Strand: Direct

Name: trbI [H]

Synonym: Rmet_1350

Alternate gene names: 94310292

Gene position: 1459093-1460364 (Clockwise)

Preceding gene: 94310291

Following gene: 94310293

Centisome position: 37.15

GC content: 69.26

Gene sequence:

>1272_bases
ATGATCCAGGACGACACCCCCGACCTCGCCAGGCCGCAAGCGGGCAAGGTCGCGCCCGAGGCGTTGGCGCTGCGCGCCCA
GCCGCGCCCGGTCACGCGCCTGAACCGGCGCACGCTGGCCATCCTCGTCGGCGGCCTGTCGGTCGCCGTGCTCGGAGCCA
CGATCTGGTCGTTGCAACCGCAGCGGCGCAGCGCGGGCGAGCAGCCCGAGCTTTACAACGTCGATCGCGTCTCGAAGTCC
GAAGGGCTGGACGGCCTGCCGGCCGACTACTCGAAGCTGCAGCCGAAGGTGCCCGAGTTGGGGCCGCCGCTGCCGGGCGA
TCTTGGCCCGGCCATCGTGAACTCGCAGCAGCCGGCCGTGGCCGCTTACGCGGCCCCCGGCCACCATCCCAACGATGCCT
TGCGCAAGGAGGAAGAAGCCGCTGCGGCTTCGTCGGTGTTCTTCCGTTCGGGCGGCCAAGGCCCCACCGCCGCGGTGGCG
CAGGCGACGCCGGGTGCGCCTGGTGGTGCAAGCGCGCTCGCGGCCTTCGACCCGCTCGCAGCCGGGTCGGCCTCGACGGC
GGCGCAGCCTGGCGACCCGACCGCCGTGCAGAACCGGCAAGACCAGAAGGAGGCGTTCCTGAAAGCCGGTTCTACGGAAA
CCCGCAATTCCGGCAATCTGGCGCTGCCGGCGTCGCCCTATCAGGTGATGGCTGGAACCGTGATCGCGGGCGCGCTGGTG
ACGGGCATCAAGTCGGACTTGCCGGGCGACGTGATCGCCACGGTGACGGAGCCGGTCTATGACACGGCTACAGGCAAGTA
CCTGCTGATCCCGCAGGGGTCGCGCATCCTCGGGCGCTACAACAGCCAGGTCAGCTACGGGCAGAGCCGCGTGCAGGTGG
TGTGGAACCGGATCATCCTGCCCGACACGTCCTCGCTGACGCTCGACAACCTTGTCGGCACCGATCCAGCCGGCTATTCC
GGTCTAGAGGATGACGTGGATTGGCATTGGAATCGCATCGTCGCGGGCGCGGTGCTGACGACGCTGCTGGGCGTCGGAGC
CGAGCTGGCCGCGCCGGAGAACCGCCAGGACGGCAACCGCATCGTCATCGCCGGGCGCGACAGCGCCCAGGACGGCATCA
ATCAGGTCGGCCAGGAGATCACCCGGCGCAACATGAACATCCAGCCGACGCTGACCGAGCGGCCGGGCCTGCCGGTGCGG
ATCATCGTCAACCGGGATCTAGTGCTGCGGCCCTACCAGCCGCTGTTCTTCAATCGGGGAGCTTCGCAATGA

Upstream 100 bases:

>100_bases
TGGATCGCCTCTTTGGCGCGGCAGAGCTGCGCCTGGGCGGCGACAAGGGCGCCATGGTGCGGATCGAGCGCACGGATGGC
GTGGCACGGAGGAACTGACC

Downstream 100 bases:

>100_bases
GCGCGACCAAGAAGCTGCGGCTCGGGCCGCTGCCCAAGACCGAGAACGTCAAGCTGACCTTTGCCTGCCCGGCCAGCCTG
AAAGCCGACCTCGACCGCTA

Product: type IV secretion system transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPQRRSAGEQPELYNVDRVSKS
EGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAVAAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVA
QATPGAPGGASALAAFDPLAAGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALV
TGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYS
GLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVR
IIVNRDLVLRPYQPLFFNRGASQ

Sequences:

>Translated_423_residues
MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPQRRSAGEQPELYNVDRVSKS
EGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAVAAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVA
QATPGAPGGASALAAFDPLAAGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALV
TGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYS
GLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVR
IIVNRDLVLRPYQPLFFNRGASQ
>Mature_423_residues
MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPQRRSAGEQPELYNVDRVSKS
EGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAVAAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVA
QATPGAPGGASALAAFDPLAAGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALV
TGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYS
GLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVR
IIVNRDLVLRPYQPLFFNRGASQ

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 44447; Mature: 44447

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQP
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHCCC
QRRSAGEQPELYNVDRVSKSEGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAV
HHHCCCCCCCCCCCHHCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCE
AAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVAQATPGAPGGASALAAFDPLA
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
AGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALV
CCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
TGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIIL
HHHHHCCCCCEEEHHCCCHHHCCCCCEEEEECCCHHHHHCCCCHHHCHHHHHHHHHEEEC
PDTSSLTLDNLVGTDPAGYSGLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNR
CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCE
IVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRG
EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHEECCC
ASQ
CCC
>Mature Secondary Structure
MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQP
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHCCC
QRRSAGEQPELYNVDRVSKSEGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAV
HHHCCCCCCCCCCCHHCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCE
AAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVAQATPGAPGGASALAAFDPLA
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
AGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALV
CCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
TGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIIL
HHHHHCCCCCEEEHHCCCHHHCCCCCEEEEECCCHHHHHCCCCHHHCHHHHHHHHHEEEC
PDTSSLTLDNLVGTDPAGYSGLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNR
CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCE
IVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRG
EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHEECCC
ASQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]