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The map label for this gene is trbL

Identifier: 94310289

GI number: 94310289

Start: 1455993

End: 1457372

Strand: Direct

Name: trbL

Synonym: Rmet_1347

Alternate gene names: NA

Gene position: 1455993-1457372 (Clockwise)

Preceding gene: 94310288

Following gene: 94310290

Centisome position: 37.07

GC content: 68.62

Gene sequence:

>1380_bases
ATGAATGACGTGACCATCATCGACCAGTTCCTCAACACCTTCGCCACCTACATCGACTCGGGTTTCGGACTGCTGCGGGG
CGAAGTGGCGTTCCTCACGGCCACGCTGATCGTCATCGACATGACGATCGCCGGCCTGTATTGGGCCATGAGCCATGCCA
CCGGCCAGGGCGAGGACGTGATCGCCAAGCTGCTGCGCAAGGTGCTCTACGTCGGTGCCTTCGCCTATATCCTCAACAAC
TTCAACTGGCTGGCCAGCATCGTGTTCCGCTCGTTCGCCGGGTTGGGCATCACCGCCACCGGCTCGGCCATCACGATGGA
GAACTTCCTCCAGCCGGGCCGGCTGGCCAAGACCGGCATCGACGCCGGGGCGCCAATTCTGGAACAGATCGGCGAGATGG
CCGGGTTTCCCGAGGTGTTCGTGAACCTCGATCCCATCGTGGTGATGTTCCTCGCTTGGTTGGTCGTGGTCCTGTGCTTC
TTCGTGCTGGCGATCCAGCTTTTCATCACGCTGATCGAGTTCAAGCTGACCACACTCGCGGGCTTCGTGTTGGTGCCGTT
CGCGCTGTGGAACAAGACCAGCTTCCTCGCCGAGAAGGTGCTGGGCAACGTGGTGTCGTCCGGCGTCAAGGTACTGGTGC
TGGCCGTGATCGTGGGCATCGGCTCGGGCCTGTTCGCGCAGTTTCAAGTCCATCCCGCCGAACCGTCCATCGACCACGCG
CTGGTCATCATGCTGGCCTCGCTCACCTTGCTGGCGCTGGGGATCTTCGGCCCCGGCGTCGCCACGGGCCTCGTGTCCGG
TGCGCCGCAGCTCGGCGCTGGCGCAATGGCCGGTGCTGCTGTCGGCGCTGCCGGCACGGCTGTCGCCATCGGCGCCGCCG
CGACGGGCGTGGGTGGCGCCGTGGCTGCTGGCGCGCGCATGGCCCCGGCTGCCGCCAAGCTGGCCGGAAGCGGTGCGCGC
GCCGCCACGACGGCGGCCGGCAGTGCGAAGTCGGCGTTCCAGGCCGGTTCCGCCGCCGCTGGCGGCGGCGCAAAGGGCGC
GATGGCGGGCCTGGGCAACGTCGCCAAGACCGGCGCGCAGGCCGCCGGATACGCGGCTGCATCCCGTGCTTCCGCTGCCG
GGCAGCGGATGGCCGCTCCGTTCCGTGCTGGCTGGAATGGCTCGATGGCCGACGCTGGCGCGTCAGCCGGCCAAGCCTCC
GCAGGAGAAGCCCCCGCAGGCGACGCCGCTGCACAGAAGCCGGAACAACCCGCCTGGGCCAAGCGGCTGCATCGCCGCCA
GCAACTCACCCACGCCGCGACCACCGCCGCGCACACGCTGCGCGGCGGTGACGGTGGCGGCTCGGGGCAAGGCCCGAGCC
TGCGCGGCTCCGACGAGTAA

Upstream 100 bases:

>100_bases
AATACCTGACGCTGCCCGACCTGCCGCCGATCCCGCCGAGCTTCGAGGAATCGGCCGATGGCATGGCGCCGGCCGTTCCC
GTCGAACCGGAGGACACGCC

Downstream 100 bases:

>100_bases
AGCGATTCACAAGGAGAACTGACCATGCGATTCAGAAAACCGCAGGTGCGCTATGCCGACACGCCGCAGCCTGCCACGCC
GTACCAAGCTGCCGGCCAGG

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Plasmid Conjugal Transfer Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MNDVTIIDQFLNTFATYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYILNN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGEMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGVATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATTAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQAAGYAAASRASAAGQRMAAPFRAGWNGSMADAGASAGQAS
AGEAPAGDAAAQKPEQPAWAKRLHRRQQLTHAATTAAHTLRGGDGGGSGQGPSLRGSDE

Sequences:

>Translated_459_residues
MNDVTIIDQFLNTFATYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYILNN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGEMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGVATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATTAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQAAGYAAASRASAAGQRMAAPFRAGWNGSMADAGASAGQAS
AGEAPAGDAAAQKPEQPAWAKRLHRRQQLTHAATTAAHTLRGGDGGGSGQGPSLRGSDE
>Mature_459_residues
MNDVTIIDQFLNTFATYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYILNN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGEMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGVATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATTAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQAAGYAAASRASAAGQRMAAPFRAGWNGSMADAGASAGQAS
AGEAPAGDAAAQKPEQPAWAKRLHRRQQLTHAATTAAHTLRGGDGGGSGQGPSLRGSDE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45901; Mature: 45901

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVTIIDQFLNTFATYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IAKLLRKVLYVGAFAYILNNFNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCHHHCCC
DAGAPILEQIGEMAGFPEVFVNLDPIVVMFLAWLVVVLCFFVLAIQLFITLIEFKLTTLA
CCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLVPFALWNKTSFLAEKVLGNVVSSGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
LVIMLASLTLLALGIFGPGVATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHH
VAAGARMAPAAAKLAGSGARAATTAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQ
HHCCCHHCHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCH
AAGYAAASRASAAGQRMAAPFRAGWNGSMADAGASAGQASAGEAPAGDAAAQKPEQPAWA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH
KRLHRRQQLTHAATTAAHTLRGGDGGGSGQGPSLRGSDE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDVTIIDQFLNTFATYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IAKLLRKVLYVGAFAYILNNFNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCHHHCCC
DAGAPILEQIGEMAGFPEVFVNLDPIVVMFLAWLVVVLCFFVLAIQLFITLIEFKLTTLA
CCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLVPFALWNKTSFLAEKVLGNVVSSGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
LVIMLASLTLLALGIFGPGVATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHH
VAAGARMAPAAAKLAGSGARAATTAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQ
HHCCCHHCHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCH
AAGYAAASRASAAGQRMAAPFRAGWNGSMADAGASAGQASAGEAPAGDAAAQKPEQPAWA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH
KRLHRRQQLTHAATTAAHTLRGGDGGGSGQGPSLRGSDE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA