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The map label for this gene is trbJ

Identifier: 94310287

GI number: 94310287

Start: 1454926

End: 1455663

Strand: Direct

Name: trbJ

Synonym: Rmet_1345

Alternate gene names: NA

Gene position: 1454926-1455663 (Clockwise)

Preceding gene: 94310286

Following gene: 94310288

Centisome position: 37.04

GC content: 64.09

Gene sequence:

>738_bases
ATGAAGATCCGTGCGCTTTCCATTTCTCTCGCCGCCGCGCTGTCGGTATCGCTGCTGGCCGTACAACCGGCATCTGCCAT
CACGGTGTTCGATCCGTCCAACTTCGTGCAGAACACGCTGACCGCGATTCGCACGCTGGAGCAGATCAACAACCAGATCC
AGCAGCTTCAGAACGAAGCGCAGATGCTGATGAACCAGGCGCGCAACCTCGCCAGCCTGCCGTCCAGCGTGGTGAACCAG
TTGCGCGCCAATCTGGCGACGACCGAGCGGCTGATCGCTCAGGCTCGCGGCTTGGCCTACGACGTGACGAACCTCGATCG
GGAGTTCGCGCGCCTGTATCCCGAGCAGTACGCCGCCACCGTCAGCGGCGACCAGATGTACCGCGACGCGCAGGAGCGTT
GGCGGAACACGCTCAACGGCTTGCAGACCACCATGCAGATGCAGGCGCAGGTGTCGCAGAACCTGGGCGAAGACGAAAGC
GTGCTGGCCGACCTTGTGAGCAAGAGCCAGTCGGCCCACGGTGCATTGCAGGCCATGCAGGCCATGAATCAGTTGCTCGC
CTTGCAGGCCAAGCAATCGATACAGGCGCAACGGCTCCAGATCACACAAGACCGGGCCGCCTCGCTGGAGCTGGCGCGAC
AGGCGGCGGCCACGGAACGTGCCCGCGAAGTGCGGCGGCGCTTCCTGGGCGAAGGCACGCCGTACACGCCGCAGACCGTG
AACTTCTACCGCGACTGA

Upstream 100 bases:

>100_bases
GCCATTGCGGCCTCGATTGGGCGGCCGATCTGCTGCCCTCGTTCCCCGGCCTCGCGCCGGGTTCCCTCCGTACCGCTGAC
CACCTATTGGAGAACCAGCT

Downstream 100 bases:

>100_bases
CGGGAGGCCGCCATGCGATGTGTCCTCGTCCTGTGTGCTGTGCTGCTGGCCGCTTGCAGCGAGCAGCCGGCCGACAATCT
TGCCGATGCCTTGGCCGCCG

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIRALSISLAAALSVSLLAVQPASAITVFDPSNFVQNTLTAIRTLEQINNQIQQLQNEAQMLMNQARNLASLPSSVVNQ
LRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAATVSGDQMYRDAQERWRNTLNGLQTTMQMQAQVSQNLGEDES
VLADLVSKSQSAHGALQAMQAMNQLLALQAKQSIQAQRLQITQDRAASLELARQAAATERAREVRRRFLGEGTPYTPQTV
NFYRD

Sequences:

>Translated_245_residues
MKIRALSISLAAALSVSLLAVQPASAITVFDPSNFVQNTLTAIRTLEQINNQIQQLQNEAQMLMNQARNLASLPSSVVNQ
LRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAATVSGDQMYRDAQERWRNTLNGLQTTMQMQAQVSQNLGEDES
VLADLVSKSQSAHGALQAMQAMNQLLALQAKQSIQAQRLQITQDRAASLELARQAAATERAREVRRRFLGEGTPYTPQTV
NFYRD
>Mature_245_residues
MKIRALSISLAAALSVSLLAVQPASAITVFDPSNFVQNTLTAIRTLEQINNQIQQLQNEAQMLMNQARNLASLPSSVVNQ
LRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAATVSGDQMYRDAQERWRNTLNGLQTTMQMQAQVSQNLGEDES
VLADLVSKSQSAHGALQAMQAMNQLLALQAKQSIQAQRLQITQDRAASLELARQAAATERAREVRRRFLGEGTPYTPQTV
NFYRD

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27224; Mature: 27224

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRALSISLAAALSVSLLAVQPASAITVFDPSNFVQNTLTAIRTLEQINNQIQQLQNEA
CCEEHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLMNQARNLASLPSSVVNQLRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAAT
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VSGDQMYRDAQERWRNTLNGLQTTMQMQAQVSQNLGEDESVLADLVSKSQSAHGALQAMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMNQLLALQAKQSIQAQRLQITQDRAASLELARQAAATERAREVRRRFLGEGTPYTPQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NFYRD
CCCCC
>Mature Secondary Structure
MKIRALSISLAAALSVSLLAVQPASAITVFDPSNFVQNTLTAIRTLEQINNQIQQLQNEA
CCEEHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLMNQARNLASLPSSVVNQLRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAAT
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VSGDQMYRDAQERWRNTLNGLQTTMQMQAQVSQNLGEDESVLADLVSKSQSAHGALQAMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMNQLLALQAKQSIQAQRLQITQDRAASLELARQAAATERAREVRRRFLGEGTPYTPQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NFYRD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA