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The map label for this gene is ybhS [H]

Identifier: 94310213

GI number: 94310213

Start: 1391782

End: 1392951

Strand: Reverse

Name: ybhS [H]

Synonym: Rmet_1269

Alternate gene names: 94310213

Gene position: 1392951-1391782 (Counterclockwise)

Preceding gene: 94310219

Following gene: 94310212

Centisome position: 35.46

GC content: 65.73

Gene sequence:

>1170_bases
ATGAACGGCGCCACAATGCACAAAGACGGGAGTGGCCCCCTGCAGACCGACTTGCGCCGTTTTGATCTGCGGCGCTTGAT
GGCACTGGTGACCAAGGAAAGCTACCAGGCGCTGCGCGACCCCTCGACGCTGCTGATCGCGTTCGTGCTGCCGGTGGTGT
TGGTGCTGCTGTTCGCCTATGCGGTGTCGCTGGATGCGAAGGATGTCCGTGTCGGCGTGGTCCTGGAGTCGCCCGGCGCA
TCGGCACAGTCGCTGGCCGCAGCGTTTTCGGGCACCCGCTTCCTGAATACGCGCTTCGCCCATGACCGGCGCGAAGTGGC
CGACCAGCTGGTCTCCGGCGACCTGCGCGGCTACGTGGTGATTCCGCAGGATTTCGAGCAGCGTCTGGCCCAGCGTGGCA
GCGAGCCGCTGGTGCAGATCGTCACCGATGGCTCCTACCCCAATACCGCCAACTACGTCGAAAACTACGCCCGCGGCGTG
GTCCAGTCCTGGCGCGCTGGGCTGGATGTCGCGGCGCCCGCACAGGCCGTCATGCTGGAACCGCGCTACTGGTTCAACCC
CGAGTTGGAAAGCCGCCGCGCACTGATTCCCGGCGCCATCGCCATCGTCATGACCATCATCGGCACCATGCTGACTGCAC
TGGTGGTGGCGCGTGAATGGGAGCGCGGCACCATGGAGGCGGTGCTGTCCACGCCGGCCTCGGTGGCCGAAATCCTGATC
GGCAAGCTGCTGCCGTACTTCGTGCTCGGCATGCTGTCCACGCTGGGTGCGGCGGTGCTGGCGGTGTTCGTGTTCGGCGT
GCCGATGCGGGGCTCGCTGGCGGCGCTGCTGCTCCTGTCGGCGGTGTTCATGGTGCCGGCGCTGGGTCAGGGCCTGCTGA
TTTCCTCCTTGGCACGCAACCAGTTCCTGGCCGCGCAGATCGCGCTGTTCACGGGTTTTCTGCCGGCTTTCATGCTGTCG
GGCTTTCTGTATGAGATCGAGGCGATGCCCGCGCCAATCCGAGCCATCACCCGGCTGGTTCCGGCGCGTTACTTCGTCGA
TTCGCTGAAGACGGTGTTCCTGGCCGGCGACATCTGGGCGGTGTTCCTGCCCAACCTGGCGGCCATGGCGGCGATCGGGG
TGCTGTTCTTCGTGATCGCCAAGCGCGCCACGCGCAAGAACCTGGAGTAA

Upstream 100 bases:

>100_bases
TCAAGCGTTCGGCGATCAGCCCAGAACGGCCCGACCCGACGATGGAGGACGCCTTCATTCACCTGGTGGAGTCGGCGGAC
CGCGAGATGGAGGCCACCAT

Downstream 100 bases:

>100_bases
GGCCGTGTTGAGCTCCGCATTTTCATTCACCCGCCTGCGCGCCCAGTTCATCAAGGAAGTGCTCAGCGTCCTGCGCGACC
CGCGCAGCCGCATGGTGGTG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNGATMHKDGSGPLQTDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLVLLFAYAVSLDAKDVRVGVVLESPGA
SAQSLAAAFSGTRFLNTRFAHDRREVADQLVSGDLRGYVVIPQDFEQRLAQRGSEPLVQIVTDGSYPNTANYVENYARGV
VQSWRAGLDVAAPAQAVMLEPRYWFNPELESRRALIPGAIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILI
GKLLPYFVLGMLSTLGAAVLAVFVFGVPMRGSLAALLLLSAVFMVPALGQGLLISSLARNQFLAAQIALFTGFLPAFMLS
GFLYEIEAMPAPIRAITRLVPARYFVDSLKTVFLAGDIWAVFLPNLAAMAAIGVLFFVIAKRATRKNLE

Sequences:

>Translated_389_residues
MNGATMHKDGSGPLQTDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLVLLFAYAVSLDAKDVRVGVVLESPGA
SAQSLAAAFSGTRFLNTRFAHDRREVADQLVSGDLRGYVVIPQDFEQRLAQRGSEPLVQIVTDGSYPNTANYVENYARGV
VQSWRAGLDVAAPAQAVMLEPRYWFNPELESRRALIPGAIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILI
GKLLPYFVLGMLSTLGAAVLAVFVFGVPMRGSLAALLLLSAVFMVPALGQGLLISSLARNQFLAAQIALFTGFLPAFMLS
GFLYEIEAMPAPIRAITRLVPARYFVDSLKTVFLAGDIWAVFLPNLAAMAAIGVLFFVIAKRATRKNLE
>Mature_389_residues
MNGATMHKDGSGPLQTDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLVLLFAYAVSLDAKDVRVGVVLESPGA
SAQSLAAAFSGTRFLNTRFAHDRREVADQLVSGDLRGYVVIPQDFEQRLAQRGSEPLVQIVTDGSYPNTANYVENYARGV
VQSWRAGLDVAAPAQAVMLEPRYWFNPELESRRALIPGAIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILI
GKLLPYFVLGMLSTLGAAVLAVFVFGVPMRGSLAALLLLSAVFMVPALGQGLLISSLARNQFLAAQIALFTGFLPAFMLS
GFLYEIEAMPAPIRAITRLVPARYFVDSLKTVFLAGDIWAVFLPNLAAMAAIGVLFFVIAKRATRKNLE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=369, Percent_Identity=44.7154471544715, Blast_Score=335, Evalue=2e-93,
Organism=Escherichia coli, GI48994943, Length=389, Percent_Identity=31.1053984575836, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787010, Length=366, Percent_Identity=29.5081967213115, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI226510979, Length=383, Percent_Identity=27.154046997389, Blast_Score=83, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24650855, Length=373, Percent_Identity=23.3243967828418, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650853, Length=373, Percent_Identity=23.3243967828418, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42223; Mature: 42223

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGATMHKDGSGPLQTDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLVLLFAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVSLDAKDVRVGVVLESPGASAQSLAAAFSGTRFLNTRFAHDRREVADQLVSGDLRGYVV
HHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IPQDFEQRLAQRGSEPLVQIVTDGSYPNTANYVENYARGVVQSWRAGLDVAAPAQAVMLE
CCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEC
PRYWFNPELESRRALIPGAIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILI
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHH
GKLLPYFVLGMLSTLGAAVLAVFVFGVPMRGSLAALLLLSAVFMVPALGQGLLISSLARN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QFLAAQIALFTGFLPAFMLSGFLYEIEAMPAPIRAITRLVPARYFVDSLKTVFLAGDIWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLPNLAAMAAIGVLFFVIAKRATRKNLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGATMHKDGSGPLQTDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLVLLFAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVSLDAKDVRVGVVLESPGASAQSLAAAFSGTRFLNTRFAHDRREVADQLVSGDLRGYVV
HHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IPQDFEQRLAQRGSEPLVQIVTDGSYPNTANYVENYARGVVQSWRAGLDVAAPAQAVMLE
CCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEC
PRYWFNPELESRRALIPGAIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILI
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHH
GKLLPYFVLGMLSTLGAAVLAVFVFGVPMRGSLAALLLLSAVFMVPALGQGLLISSLARN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QFLAAQIALFTGFLPAFMLSGFLYEIEAMPAPIRAITRLVPARYFVDSLKTVFLAGDIWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLPNLAAMAAIGVLFFVIAKRATRKNLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]