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The map label for this gene is repA

Identifier: 94310198

GI number: 94310198

Start: 1375860

End: 1376717

Strand: Direct

Name: repA

Synonym: Rmet_1254

Alternate gene names: NA

Gene position: 1375860-1376717 (Clockwise)

Preceding gene: 94310197

Following gene: 94310199

Centisome position: 35.03

GC content: 66.43

Gene sequence:

>858_bases
ATGTCCAGCACCGCGCTGCCCATGCGGCAGCGGCCGTTGCAGGAGCGCGAACAGCTCGACCTGTTCCGCGCCTTGCCCGG
CGACATGGCACCGCGCGACAGCCAGGATTTGATGGCCTATCCGTTCTTCTCGCTCGCCAAGTCCAAGCGGGTCAAGCCCA
TCGACTTCCGCGCGGGCAACGTGACTATCCGCGTGGAGGGCACGCAGGAGCACGGCATCGCCACGATTTGGGATGCGGAC
GTGCTGATATGGGCAGCTTCGCAGATCGTGGAGGCGAAGGACGCGGGCCTGCGCCCGTCGCGGCTGATGCGCGCCACGCC
CTACGAGATCCTGCGCTTCATTGGACGCGGCAAGTCGCTGCGCGACTACCAGCGCCTCAAGGCCGCGCTCGACCGGCTGC
AATCGACCACGGTGGCCACGTCCATCCGAGAAACCACTGGAAGGCGCTTGCATCGCTTCTCGTGGATCAACGAATGGAAG
GAACTGGCCGATGCCAGCGGCACGCCGCTGGGCATCGAGCTGATCCTGCCGGACTGGTTCTATGCGGGCGTGCTCGACGC
CGCCCTGGTGCTGACCATCGACCCGGCGTACTTCCGGCTCACTGGAGGAATCGAGCGGTGGCTGTACCGCCTGGTGCGCA
AGCACGGCGGCAAGCAGGCATACGGCTGGCAGTTCGACTTTCGCTACCTGCACCAGAAATCCGGCAGCACCGCCAAGCCC
TACGACTTCGCCTGCGACCTGCGCGCGCTGGTCGCGCGGCAATCGCTGCCCGGCTACGTCCTGGGCATCGAGCGGATGCC
GGACAACGGCATGGAGCTGCTGACCTTCCGGCCCGTGCCGCAGACGGCATGGGGATAA

Upstream 100 bases:

>100_bases
CCGACCGCAGCTTCGAGACGACTTCCGATCCCGAATATGCCGAGCACCACTCGGCCGACAGCCGTGCGCGCTGATCGGCG
GCGCGCGGCAGGCCATCGCC

Downstream 100 bases:

>100_bases
CTCCGGGAAAGCCTGTGGATGGTGTCGTGCTATCAGGCGTGCGGGGTATCGTGCTATCAGGCGTGGGACTATCGTGCTAT
CAGGCGTGCCGATCGGCCGA

Product: replication initiator and transcription repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSSTALPMRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLAKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDAD
VLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWK
ELADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVPQTAWG

Sequences:

>Translated_285_residues
MSSTALPMRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLAKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDAD
VLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWK
ELADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVPQTAWG
>Mature_284_residues
SSTALPMRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLAKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDADV
LIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKE
LADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKPY
DFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVPQTAWG

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 32461; Mature: 32330

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTALPMRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLAKSKRVKPIDFRAGN
CCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCE
VTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSL
EEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCH
RDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGTPLGIELILPDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHH
YAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
HHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCC
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVPQTAWG
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SSTALPMRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLAKSKRVKPIDFRAGN
CCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCE
VTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSL
EEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCH
RDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGTPLGIELILPDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHH
YAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
HHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCC
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVPQTAWG
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]