| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310138
Identifier: 94310138
GI number: 94310138
Start: 1307866
End: 1308561
Strand: Direct
Name: 94310138
Synonym: Rmet_1193
Alternate gene names: NA
Gene position: 1307866-1308561 (Clockwise)
Preceding gene: 94310132
Following gene: 94310141
Centisome position: 33.3
GC content: 67.53
Gene sequence:
>696_bases ATGCAGATCGACGATTCCTCACTTCAGGCCCTGTTGGCAACCTGGCCGCTTCCGACCCTCTCCGTGGCGATGCTCGCCTG GGTGGTGTCGCAGCGGCCATGGCGGCTGCTGCGGCAGGAACCGCTCCAGCACGCCTGGCTCGGCGGGCTCGTCTTCCTGA CCTTGCTGTGGTCGGCGCGGGCGACGGTCGGGACCGGGGTCGTGGTCCAACTGATGGGGGCCCCGCTGGCGGTGACGATG TTCGGGCTGCCGCTGGCGATGCTGACGCTGGCCATTGTCGATCTGGTGTCGCTGCTGGGGCTGGCTTACCTGGCGGGGCA GGGCTGGGCGGATATCGCCTGGGTGTCCCTGGCGCCGCGCTTCATCTGGATGGCGGCGGCTCCGGGGTTGCTGACTGCCG GGCTACAGGCCGTGATGCGACGCCGACTACCGCGCCACCCGTTCATCTTCATTCTCGGTCACGGCTATTTCGCCCCGCTG GTGGCCGCCATCGTCGCCGGCGGCCTTCGCACGCTCTGGCAGTTCCATTTGGGACCGCCCCATGCCGGGCTGACGATCGG GGACAGCCTGACCGGCGCCGTGGTGATCGGGTTCGGTGAGGCATTCCTGACGGGGATGCTGGTGGCGATCTTCGTCGTCT ATCGCCCGCAATGGGTGCTGACGTTCACAGACGAGGACTATCTGACGGGGAAGTAA
Upstream 100 bases:
>100_bases TGAAACCCGGATTATAAAGGGGTTGATCAGAATCAGAACGGGCTGCCTGGCTTGATCGGATACAACCCGGTTTCTGGCCG GGGCTGCTAGCATCCGCCCG
Downstream 100 bases:
>100_bases CGAGCGGCCAAGGGAAGGACAAGCGCCGTTCGGCCGGCAGTGGGCAGGGAGGCGGCTCCTTCCCCCGCGACGGGGAGAAG GAGCGGCAAGGCGGGACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein CbiM Homolog
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MQIDDSSLQALLATWPLPTLSVAMLAWVVSQRPWRLLRQEPLQHAWLGGLVFLTLLWSARATVGTGVVVQLMGAPLAVTM FGLPLAMLTLAIVDLVSLLGLAYLAGQGWADIAWVSLAPRFIWMAAAPGLLTAGLQAVMRRRLPRHPFIFILGHGYFAPL VAAIVAGGLRTLWQFHLGPPHAGLTIGDSLTGAVVIGFGEAFLTGMLVAIFVVYRPQWVLTFTDEDYLTGK
Sequences:
>Translated_231_residues MQIDDSSLQALLATWPLPTLSVAMLAWVVSQRPWRLLRQEPLQHAWLGGLVFLTLLWSARATVGTGVVVQLMGAPLAVTM FGLPLAMLTLAIVDLVSLLGLAYLAGQGWADIAWVSLAPRFIWMAAAPGLLTAGLQAVMRRRLPRHPFIFILGHGYFAPL VAAIVAGGLRTLWQFHLGPPHAGLTIGDSLTGAVVIGFGEAFLTGMLVAIFVVYRPQWVLTFTDEDYLTGK >Mature_231_residues MQIDDSSLQALLATWPLPTLSVAMLAWVVSQRPWRLLRQEPLQHAWLGGLVFLTLLWSARATVGTGVVVQLMGAPLAVTM FGLPLAMLTLAIVDLVSLLGLAYLAGQGWADIAWVSLAPRFIWMAAAPGLLTAGLQAVMRRRLPRHPFIFILGHGYFAPL VAAIVAGGLRTLWQFHLGPPHAGLTIGDSLTGAVVIGFGEAFLTGMLVAIFVVYRPQWVLTFTDEDYLTGK
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25007; Mature: 25007
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIDDSSLQALLATWPLPTLSVAMLAWVVSQRPWRLLRQEPLQHAWLGGLVFLTLLWSAR CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHH ATVGTGVVVQLMGAPLAVTMFGLPLAMLTLAIVDLVSLLGLAYLAGQGWADIAWVSLAPR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FIWMAAAPGLLTAGLQAVMRRRLPRHPFIFILGHGYFAPLVAAIVAGGLRTLWQFHLGPP HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC HAGLTIGDSLTGAVVIGFGEAFLTGMLVAIFVVYRPQWVLTFTDEDYLTGK CCCEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure MQIDDSSLQALLATWPLPTLSVAMLAWVVSQRPWRLLRQEPLQHAWLGGLVFLTLLWSAR CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHH ATVGTGVVVQLMGAPLAVTMFGLPLAMLTLAIVDLVSLLGLAYLAGQGWADIAWVSLAPR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FIWMAAAPGLLTAGLQAVMRRRLPRHPFIFILGHGYFAPLVAAIVAGGLRTLWQFHLGPP HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC HAGLTIGDSLTGAVVIGFGEAFLTGMLVAIFVVYRPQWVLTFTDEDYLTGK CCCEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA