| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310019
Identifier: 94310019
GI number: 94310019
Start: 1165808
End: 1166860
Strand: Reverse
Name: 94310019
Synonym: Rmet_1074
Alternate gene names: NA
Gene position: 1166860-1165808 (Counterclockwise)
Preceding gene: 94310020
Following gene: 94310017
Centisome position: 29.71
GC content: 63.63
Gene sequence:
>1053_bases ATGACGGCACGCTTCCGGGGTCGAAGCTCGGCGGCCGCTTGCTTGGCGGCCATTGCCTGCGCGTTGCTCGCGGTGCCGGC GCTCGCGCACGCGGCGCGGGCGGGTAGCATTGCGCCGCCGCCAGTGCCGACCGTGCAGATGACCCGGATCGCCCTAATTG CCGACACCCCGCAATGGCCAGCCGCGGAAGCAGACGCGACTGCGCTGTTCGACATGATGAACGCGCAGCAGGTCGCGATG ATCGTCCACGCTGGTGGCATCAAGGGCGATACCGAATCCTGTGGTGACACCCTTCTCAATGCGCGGCTGCAGGTGCTCGA CGATTCGCCCACACCGCTGCTCTACGTACCTGGCGAAACCGACTGGGCTGAGTGCCAGAAGCCCTCAAACGGGAAGTTCG ATGCCGTGGAGCGGCTCAATCGATTGCGGGAGCTGTTCTTCCCGCTCGACACCACGCTTGGGCGACGCACATTGCCAGTG GTGCGTCAGTCGGATCAGGCGCTGTTCCGCAGCTATCGGGAAAACGTGCGGCTCGTCACCGGTGGCGTGATGCTGGTGGG CCTGAACCTGCCCGGCGACAACAACCACTATCGCATCGAGGGCGGGCGCAATGGCGAATTCGAGGATCGGCGCGAAGCCA ACCGGCAATGGCTGGCCAGGGCATTCTCAGTTGCCGAGCAGCGCGATCTGCCCGGCATCGTGGTCATCGCGCACGCCGAT CCGCTATTCGGGAACGGCTGGGAAAAACGTGGCAAACCAAGCCTGCTGGACGCGTTCGTGCGTCACGGGGCACGCGACGG CTATCTCGAGTTCAAGCGTCAGCTTCGTGATCTGTCCTCGAAGTTCTCTGGCCAGGTGCTGCTGGTCCATGCAAGCGATA ACGGCTTCAGCGTCGACAAGCCTTTACGCGACACGTCGGGGAAGATCGTTGCCAACTTCACGCGAGTCGCACTGCCCATC GGCACTCCTTCGCGATGGACGGAGCTGACGATCACGCCTGGCACACGGTCGGTATTCCAGGTTCAGCTACAAGATGGGCC CAAGGGCAATTGA
Upstream 100 bases:
>100_bases TGGAAGCGCTGGCCGATATCGACCCGGACAGCCTCTCGCCGCGAGAAGCGCTCGAGGCGCTGTACCGACTCAAGTCCATC TCGGAGACCGCGCGAACGGT
Downstream 100 bases:
>100_bases TATTCATCAACAAGAGGACAAAATGAAAAAGCCGGCAAATGCCGGCTTTTTCATGTTCGCGATGACCTATCGCGGATCGC TCGTGTTGTGAGACTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTARFRGRSSAAACLAAIACALLAVPALAHAARAGSIAPPPVPTVQMTRIALIADTPQWPAAEADATALFDMMNAQQVAM IVHAGGIKGDTESCGDTLLNARLQVLDDSPTPLLYVPGETDWAECQKPSNGKFDAVERLNRLRELFFPLDTTLGRRTLPV VRQSDQALFRSYRENVRLVTGGVMLVGLNLPGDNNHYRIEGGRNGEFEDRREANRQWLARAFSVAEQRDLPGIVVIAHAD PLFGNGWEKRGKPSLLDAFVRHGARDGYLEFKRQLRDLSSKFSGQVLLVHASDNGFSVDKPLRDTSGKIVANFTRVALPI GTPSRWTELTITPGTRSVFQVQLQDGPKGN
Sequences:
>Translated_350_residues MTARFRGRSSAAACLAAIACALLAVPALAHAARAGSIAPPPVPTVQMTRIALIADTPQWPAAEADATALFDMMNAQQVAM IVHAGGIKGDTESCGDTLLNARLQVLDDSPTPLLYVPGETDWAECQKPSNGKFDAVERLNRLRELFFPLDTTLGRRTLPV VRQSDQALFRSYRENVRLVTGGVMLVGLNLPGDNNHYRIEGGRNGEFEDRREANRQWLARAFSVAEQRDLPGIVVIAHAD PLFGNGWEKRGKPSLLDAFVRHGARDGYLEFKRQLRDLSSKFSGQVLLVHASDNGFSVDKPLRDTSGKIVANFTRVALPI GTPSRWTELTITPGTRSVFQVQLQDGPKGN >Mature_349_residues TARFRGRSSAAACLAAIACALLAVPALAHAARAGSIAPPPVPTVQMTRIALIADTPQWPAAEADATALFDMMNAQQVAMI VHAGGIKGDTESCGDTLLNARLQVLDDSPTPLLYVPGETDWAECQKPSNGKFDAVERLNRLRELFFPLDTTLGRRTLPVV RQSDQALFRSYRENVRLVTGGVMLVGLNLPGDNNHYRIEGGRNGEFEDRREANRQWLARAFSVAEQRDLPGIVVIAHADP LFGNGWEKRGKPSLLDAFVRHGARDGYLEFKRQLRDLSSKFSGQVLLVHASDNGFSVDKPLRDTSGKIVANFTRVALPIG TPSRWTELTITPGTRSVFQVQLQDGPKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38191; Mature: 38060
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARFRGRSSAAACLAAIACALLAVPALAHAARAGSIAPPPVPTVQMTRIALIADTPQWP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCC AAEADATALFDMMNAQQVAMIVHAGGIKGDTESCGDTLLNARLQVLDDSPTPLLYVPGET CCCCHHHHHHHHHCHHHEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEEECCCC DWAECQKPSNGKFDAVERLNRLRELFFPLDTTLGRRTLPVVRQSDQALFRSYRENVRLVT CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCEEEE GGVMLVGLNLPGDNNHYRIEGGRNGEFEDRREANRQWLARAFSVAEQRDLPGIVVIAHAD CCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PLFGNGWEKRGKPSLLDAFVRHGARDGYLEFKRQLRDLSSKFSGQVLLVHASDNGFSVDK CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC PLRDTSGKIVANFTRVALPIGTPSRWTELTITPGTRSVFQVQLQDGPKGN CCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure TARFRGRSSAAACLAAIACALLAVPALAHAARAGSIAPPPVPTVQMTRIALIADTPQWP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCC AAEADATALFDMMNAQQVAMIVHAGGIKGDTESCGDTLLNARLQVLDDSPTPLLYVPGET CCCCHHHHHHHHHCHHHEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEEECCCC DWAECQKPSNGKFDAVERLNRLRELFFPLDTTLGRRTLPVVRQSDQALFRSYRENVRLVT CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCEEEE GGVMLVGLNLPGDNNHYRIEGGRNGEFEDRREANRQWLARAFSVAEQRDLPGIVVIAHAD CCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PLFGNGWEKRGKPSLLDAFVRHGARDGYLEFKRQLRDLSSKFSGQVLLVHASDNGFSVDK CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC PLRDTSGKIVANFTRVALPIGTPSRWTELTITPGTRSVFQVQLQDGPKGN CCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA