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The map label for this gene is trxB1 [C]

Identifier: 94310008

GI number: 94310008

Start: 1156221

End: 1157282

Strand: Reverse

Name: trxB1 [C]

Synonym: Rmet_1063

Alternate gene names: 94310008

Gene position: 1157282-1156221 (Counterclockwise)

Preceding gene: 94310016

Following gene: 94310006

Centisome position: 29.46

GC content: 66.2

Gene sequence:

>1062_bases
ATGTCCACGACACCCACCTCCGCGCCAGAAACCACCCAGACCGATGTGCTGATCGTCGGCGCAGGCCCGGTGGGGCTGTT
CGCGGCGTTTCAGGCCGGTGTGCTGGGACTGAAATGCGAGATCGTGGATGTGCTCGACCGCGCCGGCGGCCAGTGCACGG
AGCTGTACCCCGAGAAGCCAATCTACGATATTCCGGCCGTCCCGGGCTGCCTCGCCCAGGACTTGGTCGACCGCCTGCTG
GAGCAATGCGCGCCTTTTGCGTTTCCGATGCACTTCAGCCAGCGTGCCGAATCGGTCAGCGACACCACCTGCACAAACGG
CCATCCGCGCCTGCTGGTGACCACCGACGCAGGCAAGCGCTTCGACGTGGCCGCGGTGCTGATCTGCGCTGGTGCCGGCG
CCTTCGCACCGCAACGTGTGTCGCTGCCAGAAGCGGCAGCGCTGGAAGACCGTCACCTCCACTACGCCGTGCGCGATCTA
TCGCGCTTCGCCGGCAAGCGTGTGATCGTGGCCGGCGGCGGCGATTCGGCTCTGGATTGGGCGATGGCATTGCGCAAGAC
TGCGGCGCGCGTGACGCTACTGCACCGGCGCGAAGGATTCCGCGCGGCCGACCACACGGTCAAGGCGATGCGTGACGCGG
TAGCCGCTGGCGAGATGGATTTCGTGGTCGGCATGCTTGGCGGGCTCCAGACCAATGGGGATGGCGCGCTGACCGGCGCG
GTGGTCAAGTCGCGCGACGGCGAGCAGACGATTCCCGCCGACGACCTTGTCGCCCTGTATGGTCTGGTGTCCGAGCCGGG
CCCGATCGCACAGTGGGACATGGATATGCGCGCGGGCCGTATCGCGGTCGATACCACGACGTATGAAAGCTCCCGCCGGG
GCATCTTCGCGGCCGGCGACATCGCGTTCTATCCGAACAAGCAGAAACTGATCCTGTCGGGCTTCCACGAGGCCGCGCTG
GCGCTGCGCAAGGCCTATCACTACGCATTCCCCGAGAAGTCGCTGGTGCACGTGCATACGAGCAACAACGCGGCGCTCAA
GGAAAGGCTCACGCACGGGTGA

Upstream 100 bases:

>100_bases
AGGGCTTTTTAGCCCTGCCAGCAAAGGTGGCGTGCCCGGATTGCCGACGACCGCAAGGTATGATGGAACCGTTACGAAAC
CGATACCTTCCTCGTCCGCC

Downstream 100 bases:

>100_bases
CGCACGGGTGACGCCTCTGCCCCCCTTCCGCTCGTGGAAGAGGGAGGCAACCGGCCTCAGATCAGAAAATCCTCGATCAG
TCTGGCCACCACCGCCGGCT

Product: thioredoxin reductase

Products: NA

Alternate protein names: FNR 1; Fd-NADP+ reductase 1

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSTTPTSAPETTQTDVLIVGAGPVGLFAAFQAGVLGLKCEIVDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLVDRLL
EQCAPFAFPMHFSQRAESVSDTTCTNGHPRLLVTTDAGKRFDVAAVLICAGAGAFAPQRVSLPEAAALEDRHLHYAVRDL
SRFAGKRVIVAGGGDSALDWAMALRKTAARVTLLHRREGFRAADHTVKAMRDAVAAGEMDFVVGMLGGLQTNGDGALTGA
VVKSRDGEQTIPADDLVALYGLVSEPGPIAQWDMDMRAGRIAVDTTTYESSRRGIFAAGDIAFYPNKQKLILSGFHEAAL
ALRKAYHYAFPEKSLVHVHTSNNAALKERLTHG

Sequences:

>Translated_353_residues
MSTTPTSAPETTQTDVLIVGAGPVGLFAAFQAGVLGLKCEIVDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLVDRLL
EQCAPFAFPMHFSQRAESVSDTTCTNGHPRLLVTTDAGKRFDVAAVLICAGAGAFAPQRVSLPEAAALEDRHLHYAVRDL
SRFAGKRVIVAGGGDSALDWAMALRKTAARVTLLHRREGFRAADHTVKAMRDAVAAGEMDFVVGMLGGLQTNGDGALTGA
VVKSRDGEQTIPADDLVALYGLVSEPGPIAQWDMDMRAGRIAVDTTTYESSRRGIFAAGDIAFYPNKQKLILSGFHEAAL
ALRKAYHYAFPEKSLVHVHTSNNAALKERLTHG
>Mature_352_residues
STTPTSAPETTQTDVLIVGAGPVGLFAAFQAGVLGLKCEIVDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLVDRLLE
QCAPFAFPMHFSQRAESVSDTTCTNGHPRLLVTTDAGKRFDVAAVLICAGAGAFAPQRVSLPEAAALEDRHLHYAVRDLS
RFAGKRVIVAGGGDSALDWAMALRKTAARVTLLHRREGFRAADHTVKAMRDAVAAGEMDFVVGMLGGLQTNGDGALTGAV
VKSRDGEQTIPADDLVALYGLVSEPGPIAQWDMDMRAGRIAVDTTTYESSRRGIFAAGDIAFYPNKQKLILSGFHEAALA
LRKAYHYAFPEKSLVHVHTSNNAALKERLTHG

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Escherichia coli, GI1787114, Length=312, Percent_Identity=25.3205128205128, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR1_RALME (Q1LPH7)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_583218.1
- ProteinModelPortal:   Q1LPH7
- SMR:   Q1LPH7
- STRING:   Q1LPH7
- GeneID:   4037860
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_1063
- eggNOG:   COG0492
- HOGENOM:   HBG669726
- OMA:   YPNKQKL
- ProtClustDB:   CLSK896839
- BioCyc:   RMET266264:RMET_1063-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 37657; Mature: 37526

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: BINDING 43-43 BINDING 51-51 BINDING 56-56 BINDING 96-96 BINDING 135-135 BINDING 300-300 BINDING 341-341

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTPTSAPETTQTDVLIVGAGPVGLFAAFQAGVLGLKCEIVDVLDRAGGQCTELYPEKP
CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEHHHHHHHHHCCCCEEECCCCCC
IYDIPAVPGCLAQDLVDRLLEQCAPFAFPMHFSQRAESVSDTTCTNGHPRLLVTTDAGKR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC
FDVAAVLICAGAGAFAPQRVSLPEAAALEDRHLHYAVRDLSRFAGKRVIVAGGGDSALDW
HHHEEEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
AMALRKTAARVTLLHRREGFRAADHTVKAMRDAVAAGEMDFVVGMLGGLQTNGDGALTGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCEEEH
VVKSRDGEQTIPADDLVALYGLVSEPGPIAQWDMDMRAGRIAVDTTTYESSRRGIFAAGD
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCCCCCCCEEEECC
IAFYPNKQKLILSGFHEAALALRKAYHYAFPEKSLVHVHTSNNAALKERLTHG
EEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
STTPTSAPETTQTDVLIVGAGPVGLFAAFQAGVLGLKCEIVDVLDRAGGQCTELYPEKP
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEHHHHHHHHHCCCCEEECCCCCC
IYDIPAVPGCLAQDLVDRLLEQCAPFAFPMHFSQRAESVSDTTCTNGHPRLLVTTDAGKR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC
FDVAAVLICAGAGAFAPQRVSLPEAAALEDRHLHYAVRDLSRFAGKRVIVAGGGDSALDW
HHHEEEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
AMALRKTAARVTLLHRREGFRAADHTVKAMRDAVAAGEMDFVVGMLGGLQTNGDGALTGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCEEEH
VVKSRDGEQTIPADDLVALYGLVSEPGPIAQWDMDMRAGRIAVDTTTYESSRRGIFAAGD
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCCCCCCCEEEECC
IAFYPNKQKLILSGFHEAALALRKAYHYAFPEKSLVHVHTSNNAALKERLTHG
EEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA