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The map label for this gene is fdx [H]

Identifier: 94309975

GI number: 94309975

Start: 1119901

End: 1120239

Strand: Direct

Name: fdx [H]

Synonym: Rmet_1030

Alternate gene names: 94309975

Gene position: 1119901-1120239 (Clockwise)

Preceding gene: 94309974

Following gene: 94309976

Centisome position: 28.51

GC content: 59.29

Gene sequence:

>339_bases
ATGCCACAGATCATCGTATTGCCCCACGTCGAGTTGTGTCCCGAAGGGGCTGTCTTCGAAGCCAACACCGGCACGAGCGT
CTGCGACGCGTTGCTTGCCAATGGCATTGAGATCGAGCATGCGTGCGAGAAGTCGTGCGCCTGCACCACCTGCCACGTGA
TCGTGCGCGAGGGTTTCAATTCGCTCGAAGACGCCGAAGAAAAGGAAGAAGACCTGCTCGACAAGGCATGGGGTCTCGAG
CCGAATTCACGCCTGTCGTGCCAGGCGCTGGTGGCGGACGACGACCTGACCGTCGAGATTCCGAAGTACACGATCAACCA
TGCCAAGGAAGGCCACTGA

Upstream 100 bases:

>100_bases
GCATGGACCGCTCGATCAAGAGCGCGCTGGCCGGCAAGAAGGTTCAGGAAATCGGCTGAAGGCGGCGCTACCCGCGCCGC
GGAAAGACAACAGGATAGAA

Downstream 100 bases:

>100_bases
GCCTGACGCCCGGAGTTTCCTCATGAAATGGACTGATACCTACGATATCGCCGCCGCGCTGTACGACAAATTTCCGGAGG
TCGATCCGCTGACGGTGCGC

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPQIIVLPHVELCPEGAVFEANTGTSVCDALLANGIEIEHACEKSCACTTCHVIVREGFNSLEDAEEKEEDLLDKAWGLE
PNSRLSCQALVADDDLTVEIPKYTINHAKEGH

Sequences:

>Translated_112_residues
MPQIIVLPHVELCPEGAVFEANTGTSVCDALLANGIEIEHACEKSCACTTCHVIVREGFNSLEDAEEKEEDLLDKAWGLE
PNSRLSCQALVADDDLTVEIPKYTINHAKEGH
>Mature_111_residues
PQIIVLPHVELCPEGAVFEANTGTSVCDALLANGIEIEHACEKSCACTTCHVIVREGFNSLEDAEEKEEDLLDKAWGLEP
NSRLSCQALVADDDLTVEIPKYTINHAKEGH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=95, Percent_Identity=40, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=72.7272727272727, Blast_Score=176, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17544202, Length=80, Percent_Identity=47.5, Blast_Score=68, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=92, Percent_Identity=38.0434782608696, Blast_Score=66, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24661503, Length=113, Percent_Identity=39.8230088495575, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12205; Mature: 12074

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIIVLPHVELCPEGAVFEANTGTSVCDALLANGIEIEHACEKSCACTTCHVIVREGFN
CCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCC
SLEDAEEKEEDLLDKAWGLEPNSRLSCQALVADDDLTVEIPKYTINHAKEGH
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCEEECCCCCCC
>Mature Secondary Structure 
PQIIVLPHVELCPEGAVFEANTGTSVCDALLANGIEIEHACEKSCACTTCHVIVREGFN
CCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCC
SLEDAEEKEEDLLDKAWGLEPNSRLSCQALVADDDLTVEIPKYTINHAKEGH
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]