Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 94309923

GI number: 94309923

Start: 1063800

End: 1064585

Strand: Direct

Name: yaaA [C]

Synonym: Rmet_0978

Alternate gene names: 94309923

Gene position: 1063800-1064585 (Clockwise)

Preceding gene: 94309920

Following gene: 94309924

Centisome position: 27.08

GC content: 63.74

Gene sequence:

>786_bases
ATGCTCATCGTCCTGTCTCCCGCCAAGTCCCTGGACTACGAGACACCCCCACGCGTCAAGTCCCATACGCTACCGCGTTT
CATCGACCGCTCGGCCACGCTGATCGAGCGCCTGCGCAAGCTCGCCCCGCAGGATGTGGCATCGCTGATGGATATTTCCG
ACAAGCTCGCGGTGCTCAATGTCACGCGTTACGCGGACTGGTCGCCCGAGTTCACGGCCGCCAACAGCAAGCAGGCCGTG
CTGGCCTTCAATGGCGATGTCTACGACGGCCTCGATGCGAAGACGCTGTCGACCGACGACCTTGCCTTCGCGCAGAAGCA
CATCCGTATCCTTTCCGGCCTCTACGGCGTGCTCCGGCCAATGGACTGGATGCAGCCGTATCGCCTGGAAATGGGCACGC
GGCTCGACAACGCCGCTGGCAAGGACCTCTACGCGTTCTGGGGCGACGACGTCACGGCGTTGATCAACAAGGACATGGCC
GAGCTCAAGCACGAGGGCTCGCTGACGCTGGTGAACCTGGCGTCCGAGGAGTATTTCAAGGTAGTGCGCCCGAAGGTGCT
GGCCGCGCGCGTGATCACGCCCGTGTTCGAGGACTGGAAGGGTGGCCGCTACAAGATCATCTCGTTCCACGCCAAGCGCG
CGCGTGGCACGATGGCCCGCTACGCGGTCACGCATCGCGTGACGGATCCCGCGCAACTGAAGCGCTTCAACGAAGACGGC
TACGCCTTCGACAAGGCCGCGTCCGACGATGCCCGTTGGGTATTCCGCCGCCGCCTGGAAGACTGA

Upstream 100 bases:

>100_bases
GGCGCCGGCATCAGGGCCGGCGCTGGAGTTGGCATCGTGGCCGGTGTGGGTGGTGTGCATTCGCTACAATCTGGTCTTTG
TTTCTGCCCCCGATTTTGCC

Downstream 100 bases:

>100_bases
GAACCAAGGAGCTACTTCATGACCTCAGCGCTGCATATCTCCACGCTGTTCGACTCGGGTGCGATCGAAGTCGAAGCCCT
CGATCGTGCCGACGACATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLIVLSPAKSLDYETPPRVKSHTLPRFIDRSATLIERLRKLAPQDVASLMDISDKLAVLNVTRYADWSPEFTAANSKQAV
LAFNGDVYDGLDAKTLSTDDLAFAQKHIRILSGLYGVLRPMDWMQPYRLEMGTRLDNAAGKDLYAFWGDDVTALINKDMA
ELKHEGSLTLVNLASEEYFKVVRPKVLAARVITPVFEDWKGGRYKIISFHAKRARGTMARYAVTHRVTDPAQLKRFNEDG
YAFDKAASDDARWVFRRRLED

Sequences:

>Translated_261_residues
MLIVLSPAKSLDYETPPRVKSHTLPRFIDRSATLIERLRKLAPQDVASLMDISDKLAVLNVTRYADWSPEFTAANSKQAV
LAFNGDVYDGLDAKTLSTDDLAFAQKHIRILSGLYGVLRPMDWMQPYRLEMGTRLDNAAGKDLYAFWGDDVTALINKDMA
ELKHEGSLTLVNLASEEYFKVVRPKVLAARVITPVFEDWKGGRYKIISFHAKRARGTMARYAVTHRVTDPAQLKRFNEDG
YAFDKAASDDARWVFRRRLED
>Mature_261_residues
MLIVLSPAKSLDYETPPRVKSHTLPRFIDRSATLIERLRKLAPQDVASLMDISDKLAVLNVTRYADWSPEFTAANSKQAV
LAFNGDVYDGLDAKTLSTDDLAFAQKHIRILSGLYGVLRPMDWMQPYRLEMGTRLDNAAGKDLYAFWGDDVTALINKDMA
ELKHEGSLTLVNLASEEYFKVVRPKVLAARVITPVFEDWKGGRYKIISFHAKRARGTMARYAVTHRVTDPAQLKRFNEDG
YAFDKAASDDARWVFRRRLED

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=56.0311284046693, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y978_RALME (Q1LPR2)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_583133.1
- STRING:   Q1LPR2
- GeneID:   4037775
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_0978
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q1LPR2
- ProtClustDB:   PRK02101
- BioCyc:   RMET266264:RMET_0978-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29645; Mature: 29645

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVLSPAKSLDYETPPRVKSHTLPRFIDRSATLIERLRKLAPQDVASLMDISDKLAVLN
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEE
VTRYADWSPEFTAANSKQAVLAFNGDVYDGLDAKTLSTDDLAFAQKHIRILSGLYGVLRP
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
MDWMQPYRLEMGTRLDNAAGKDLYAFWGDDVTALINKDMAELKHEGSLTLVNLASEEYFK
HHHCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHH
VVRPKVLAARVITPVFEDWKGGRYKIISFHAKRARGTMARYAVTHRVTDPAQLKRFNEDG
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
YAFDKAASDDARWVFRRRLED
CEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLIVLSPAKSLDYETPPRVKSHTLPRFIDRSATLIERLRKLAPQDVASLMDISDKLAVLN
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEE
VTRYADWSPEFTAANSKQAVLAFNGDVYDGLDAKTLSTDDLAFAQKHIRILSGLYGVLRP
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
MDWMQPYRLEMGTRLDNAAGKDLYAFWGDDVTALINKDMAELKHEGSLTLVNLASEEYFK
HHHCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHH
VVRPKVLAARVITPVFEDWKGGRYKIISFHAKRARGTMARYAVTHRVTDPAQLKRFNEDG
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
YAFDKAASDDARWVFRRRLED
CEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA