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The map label for this gene is ycfJ [C]

Identifier: 94309794

GI number: 94309794

Start: 930160

End: 930678

Strand: Direct

Name: ycfJ [C]

Synonym: Rmet_0849

Alternate gene names: 94309794

Gene position: 930160-930678 (Clockwise)

Preceding gene: 94309791

Following gene: 94309800

Centisome position: 23.68

GC content: 64.93

Gene sequence:

>519_bases
ATGCAAGAACAACGTAAACCGTGGCAGGTCCTTGGTGCTGCCGGTGCTCTGGCGCTGGTGGCCGGACTGGCCGGTTGTGC
GCAGCCGGGCTATGGCGGTTACGGCAACTACAGCACGGCGCCGCCGCCGACTGGTTATCAACAGCCGGGAACCAACACCT
ATCAGGCGCCTGCCGGTTCGGTGTTCGTGGGTCGCGTGGAATCGATCGAGCCGGTCCAGACCACGCAGGGCAGCTCGGGC
ATTCTGGGCACCGTGATTGGTGGTGCAGCCGGCGGTTTGCTTGGACACCAGATCGGTGGCGGTTCTGGCCAGACCGTGGC
AACGATCGTCGGCGCGGTGGGTGGCGCAGTGGCGGGTAATCAGATCGAGAAGCGGGCCGGGTCGAACACCAGCACTGCGT
ATCGCGTCAATGTCCGACTGGACGATGGCCGCGTGGCGACGGTGACGCAAAGCAATATCGGCAACCTGCGCGTCGGCGAT
CGCGCGCGAGTGGCCAACGATATGGCGACGGCGTACTAA

Upstream 100 bases:

>100_bases
GCGGAACCTTGTCAGCCCATCGCGCCTCCTAAGAGAGGCGCGAATGCAGTCTCATACTGCAGGTTCGCTGTTTGTACAGG
CGATTTGAGGAGAATACTTC

Downstream 100 bases:

>100_bases
GCCGATCGGATATCTCGATACATCGGCAAAAGAAAACGCCACGCGGCAATCGCGTGGCGTTTTTCATTCTGGCTCGACGC
TCTCGTTGCGTCGTCCGTGT

Product: putative exported 17 kDa surface antigen-like protein

Products: NA

Alternate protein names: Outer-Membrane Lipoprotein Transmembrane; Outer Membrane Lipoprotein Transmembrane; 17 KDa Surface Antigen-Like Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQEQRKPWQVLGAAGALALVAGLAGCAQPGYGGYGNYSTAPPPTGYQQPGTNTYQAPAGSVFVGRVESIEPVQTTQGSSG
ILGTVIGGAAGGLLGHQIGGGSGQTVATIVGAVGGAVAGNQIEKRAGSNTSTAYRVNVRLDDGRVATVTQSNIGNLRVGD
RARVANDMATAY

Sequences:

>Translated_172_residues
MQEQRKPWQVLGAAGALALVAGLAGCAQPGYGGYGNYSTAPPPTGYQQPGTNTYQAPAGSVFVGRVESIEPVQTTQGSSG
ILGTVIGGAAGGLLGHQIGGGSGQTVATIVGAVGGAVAGNQIEKRAGSNTSTAYRVNVRLDDGRVATVTQSNIGNLRVGD
RARVANDMATAY
>Mature_172_residues
MQEQRKPWQVLGAAGALALVAGLAGCAQPGYGGYGNYSTAPPPTGYQQPGTNTYQAPAGSVFVGRVESIEPVQTTQGSSG
ILGTVIGGAAGGLLGHQIGGGSGQTVATIVGAVGGAVAGNQIEKRAGSNTSTAYRVNVRLDDGRVATVTQSNIGNLRVGD
RARVANDMATAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17146; Mature: 17146

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQRKPWQVLGAAGALALVAGLAGCAQPGYGGYGNYSTAPPPTGYQQPGTNTYQAPAGS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VFVGRVESIEPVQTTQGSSGILGTVIGGAAGGLLGHQIGGGSGQTVATIVGAVGGAVAGN
EEEECCCCCCCCCCCCCCCCCEEHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCC
QIEKRAGSNTSTAYRVNVRLDDGRVATVTQSNIGNLRVGDRARVANDMATAY
HHHHHCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MQEQRKPWQVLGAAGALALVAGLAGCAQPGYGGYGNYSTAPPPTGYQQPGTNTYQAPAGS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VFVGRVESIEPVQTTQGSSGILGTVIGGAAGGLLGHQIGGGSGQTVATIVGAVGGAVAGN
EEEECCCCCCCCCCCCCCCCCEEHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCC
QIEKRAGSNTSTAYRVNVRLDDGRVATVTQSNIGNLRVGDRARVANDMATAY
HHHHHCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA