| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is fbp [H]
Identifier: 94309757
GI number: 94309757
Start: 886734
End: 887081
Strand: Reverse
Name: fbp [H]
Synonym: Rmet_0812
Alternate gene names: 94309757
Gene position: 887081-886734 (Counterclockwise)
Preceding gene: 94309758
Following gene: 94309750
Centisome position: 22.58
GC content: 63.79
Gene sequence:
>348_bases ATGCAAACCACTCCCTCCGGCCTGCAATTCGAAGACACCGTCGTCGGTTCGGGCGACGAAGCCAAGGCAGGCAAGCATGT GACCGTGCACTACACCGGCTGGCTCTTCGAGAACGGCCAGGCTGGCCGCAAGTTCGATTCGAGCAAGGATCGTAACGACC CGTTCGTGTTCCCGCTGGGCGCCGGCCACGTCATTCGCGGTTGGGACGAAGGCGTGCAAGGCATGAAGGTTGGTGGCACA CGCCGCCTGGTCATTCCCGCCGACCTGGGCTACGGTGCCCGTGGCGCCGGTGGTGTGATTCCTCCGAACGCCACGCTGCT GTTCGAAGTGGAACTGCTCGCGGTCTGA
Upstream 100 bases:
>100_bases CATCTGGGTCAGTGACGACGACCACAATGTGCAGATTACGCGCGAAGTACTCCAGCGCGCGGACGATTGATTCCCAGCCA CACTCAAAAGGAAGACTGCG
Downstream 100 bases:
>100_bases GCCAGAACCCGCCAATAAAAAACGGACGCCTTGGCGTCCGTTTTTTATTGCGCATAAAGCACAACCGGGGATCAACGACG CTTCATGTAGAACACAAAAA
Product: peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MQTTPSGLQFEDTVVGSGDEAKAGKHVTVHYTGWLFENGQAGRKFDSSKDRNDPFVFPLGAGHVIRGWDEGVQGMKVGGT RRLVIPADLGYGARGAGGVIPPNATLLFEVELLAV
Sequences:
>Translated_115_residues MQTTPSGLQFEDTVVGSGDEAKAGKHVTVHYTGWLFENGQAGRKFDSSKDRNDPFVFPLGAGHVIRGWDEGVQGMKVGGT RRLVIPADLGYGARGAGGVIPPNATLLFEVELLAV >Mature_115_residues MQTTPSGLQFEDTVVGSGDEAKAGKHVTVHYTGWLFENGQAGRKFDSSKDRNDPFVFPLGAGHVIRGWDEGVQGMKVGGT RRLVIPADLGYGARGAGGVIPPNATLLFEVELLAV
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=110, Percent_Identity=51.8181818181818, Blast_Score=103, Evalue=2e-23, Organism=Homo sapiens, GI4503725, Length=110, Percent_Identity=51.8181818181818, Blast_Score=103, Evalue=2e-23, Organism=Homo sapiens, GI4758380, Length=110, Percent_Identity=48.1818181818182, Blast_Score=99, Evalue=5e-22, Organism=Homo sapiens, GI206725530, Length=96, Percent_Identity=53.125, Blast_Score=99, Evalue=8e-22, Organism=Homo sapiens, GI17149844, Length=96, Percent_Identity=53.125, Blast_Score=99, Evalue=8e-22, Organism=Homo sapiens, GI17149842, Length=96, Percent_Identity=53.125, Blast_Score=99, Evalue=8e-22, Organism=Homo sapiens, GI4503729, Length=99, Percent_Identity=49.4949494949495, Blast_Score=93, Evalue=4e-20, Organism=Homo sapiens, GI224809331, Length=100, Percent_Identity=51, Blast_Score=92, Evalue=8e-20, Organism=Homo sapiens, GI224809329, Length=100, Percent_Identity=51, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI224809327, Length=100, Percent_Identity=51, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI4758384, Length=100, Percent_Identity=51, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI192448443, Length=121, Percent_Identity=42.9752066115703, Blast_Score=88, Evalue=2e-18, Organism=Homo sapiens, GI150010552, Length=106, Percent_Identity=38.6792452830189, Blast_Score=84, Evalue=2e-17, Organism=Homo sapiens, GI8923659, Length=98, Percent_Identity=41.8367346938776, Blast_Score=78, Evalue=2e-15, Organism=Homo sapiens, GI206725547, Length=97, Percent_Identity=43.298969072165, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI31317231, Length=98, Percent_Identity=43.8775510204082, Blast_Score=74, Evalue=2e-14, Organism=Homo sapiens, GI33469985, Length=95, Percent_Identity=43.1578947368421, Blast_Score=72, Evalue=7e-14, Organism=Homo sapiens, GI7706131, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI4503727, Length=118, Percent_Identity=38.9830508474576, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87082390, Length=115, Percent_Identity=46.0869565217391, Blast_Score=86, Evalue=4e-19, Organism=Escherichia coli, GI1789745, Length=115, Percent_Identity=42.6086956521739, Blast_Score=75, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71993519, Length=96, Percent_Identity=55.2083333333333, Blast_Score=99, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17540882, Length=96, Percent_Identity=47.9166666666667, Blast_Score=93, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17561782, Length=90, Percent_Identity=53.3333333333333, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561778, Length=99, Percent_Identity=40.4040404040404, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17506169, Length=111, Percent_Identity=38.7387387387387, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17506167, Length=111, Percent_Identity=38.7387387387387, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561780, Length=113, Percent_Identity=38.0530973451327, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320727, Length=105, Percent_Identity=52.3809523809524, Blast_Score=103, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6324194, Length=94, Percent_Identity=56.3829787234042, Blast_Score=99, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323482, Length=109, Percent_Identity=46.7889908256881, Blast_Score=91, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323566, Length=109, Percent_Identity=45.8715596330275, Blast_Score=87, Evalue=6e-19, Organism=Drosophila melanogaster, GI281363946, Length=97, Percent_Identity=58.7628865979381, Blast_Score=115, Evalue=4e-27, Organism=Drosophila melanogaster, GI17352457, Length=97, Percent_Identity=58.7628865979381, Blast_Score=115, Evalue=4e-27, Organism=Drosophila melanogaster, GI24655568, Length=94, Percent_Identity=58.5106382978723, Blast_Score=108, Evalue=7e-25, Organism=Drosophila melanogaster, GI24647110, Length=114, Percent_Identity=52.6315789473684, Blast_Score=106, Evalue=3e-24, Organism=Drosophila melanogaster, GI24583150, Length=100, Percent_Identity=46, Blast_Score=85, Evalue=8e-18, Organism=Drosophila melanogaster, GI21356629, Length=97, Percent_Identity=54.639175257732, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 12197; Mature: 12197
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTPSGLQFEDTVVGSGDEAKAGKHVTVHYTGWLFENGQAGRKFDSSKDRNDPFVFPLG CCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECC AGHVIRGWDEGVQGMKVGGTRRLVIPADLGYGARGAGGVIPPNATLLFEVELLAV CCCEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MQTTPSGLQFEDTVVGSGDEAKAGKHVTVHYTGWLFENGQAGRKFDSSKDRNDPFVFPLG CCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECC AGHVIRGWDEGVQGMKVGGTRRLVIPADLGYGARGAGGVIPPNATLLFEVELLAV CCCEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]