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The map label for this gene is med [H]

Identifier: 94309739

GI number: 94309739

Start: 868910

End: 870052

Strand: Reverse

Name: med [H]

Synonym: Rmet_0794

Alternate gene names: 94309739

Gene position: 870052-868910 (Counterclockwise)

Preceding gene: 94309740

Following gene: 94309738

Centisome position: 22.15

GC content: 64.13

Gene sequence:

>1143_bases
ATGATCGTCACACGCAGGACCACCCTCGCGGCCCTGGCCGCCACCGCAGTACTGGCGCTGGCCGGCTGCGGCAAGAAGGA
AGCCGAGAAGCCGGCCGAAACCGCCGCCCCGGCATCTGCGCCGGCCGCTGCGGCTGCCGAGCCGCTGAAGGTGGCGTTCG
TCTACATCGGACCGGTCGGCGACGCCGGCTGGACCTATGCCCACGACGCGGGCCGCAAGGCCGTCGAAGCCAAGTTCGGC
GACAAGGTAAAGACCACCTTCGTCGAGAACGTGCCCGAGTCCGCCGCTGACGCCGAGCGTGTGTTCCGGGACCTGGCCAG
CCAGGGCAACAAGCTGATCTTCGGCACCACGTTCGGCTACATGGAATCCATGCTGAAGGTGGCCAAGGAGTTCCCGGACG
TCAAGTTCGAGCACGCCACCGGCTTCAAGACCGCCGAGAACCTGGCGCAGTACGACGTGCGCACCTATGAGGGCGCGTAC
CTGGCTGGCGTGGTGGCTGGCAAGATGAGCAAGACCGGCAAGATGGGCGTGGTGGCGTCGGTGCCGATCCCTGAAGTGAT
CCGCAACATCGACTCGTTCACGCTGGGCGCGCGCAGCGTGAACCCGAAGGCCACGGTCAAGGTGGTCTGGGTCAACAAGT
GGTTCGATCCGGGCAAGGAACGTGAAGCCGCCACGACGCTGATCGGCCAGGGCGTGGACATGCTGATGCAGAACACCGAC
TCGGCCGCCGTGGTGCAGACCGCCCAGGAAAAGGGTGTGTACGCATTCGGCTGGGACAGCGACATGAGCAAGTTCGGCGA
GAAGGCTCACCTGGCCGCGTCCGTGATCTCGTGGGGCGTCTACTACAACAAGGTGGTCGAGGACGTGCTCAACAACCAGT
GGAAGCCCAACACCACGTGGTGGGGCCTGAAGGAAGGCATGATCGACCTGAAGGGCTTCAACACCGTGGTGCCGGATGAC
GTCAAGGCACTGGTGGAAGAGCGCAAGAAGGGTGTGATCGACGGCACCGCGCCGATCTGGAAGGGTCCGCTCAAGGACAA
CGCCGGCAAGGAACAGCTGACCAAGGATCAGGTGGCCGACGACAACTTCCTCCACAACATCAAGTTCTACGTGGACGGTG
TGGAAGGGAACGTTCCGGGCTGA

Upstream 100 bases:

>100_bases
TCCGCCCCGGCAACGCGTGACCCGTTTTCAGCAGTCAAACGAAGTCGAACCACAACTCGAATCACAAACGCATCACAAGA
CGTTCTACTAGGAGAGATCG

Downstream 100 bases:

>100_bases
CTGACCCGGTGACTGGCTCCCCACTCCCGTCTTGCGGGAGTGGGGAGAAAACCGAAGGAACTTGAATCGGCTCCGGGCAG
CCCAACCTACCGGTTCACGC

Product: putative ABC transporter periplasmic component/surface lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIVTRRTTLAALAATAVLALAGCGKKEAEKPAETAAPASAPAAAAAEPLKVAFVYIGPVGDAGWTYAHDAGRKAVEAKFG
DKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFGYMESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAY
LAGVVAGKMSKTGKMGVVASVPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNTD
SAAVVQTAQEKGVYAFGWDSDMSKFGEKAHLAASVISWGVYYNKVVEDVLNNQWKPNTTWWGLKEGMIDLKGFNTVVPDD
VKALVEERKKGVIDGTAPIWKGPLKDNAGKEQLTKDQVADDNFLHNIKFYVDGVEGNVPG

Sequences:

>Translated_380_residues
MIVTRRTTLAALAATAVLALAGCGKKEAEKPAETAAPASAPAAAAAEPLKVAFVYIGPVGDAGWTYAHDAGRKAVEAKFG
DKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFGYMESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAY
LAGVVAGKMSKTGKMGVVASVPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNTD
SAAVVQTAQEKGVYAFGWDSDMSKFGEKAHLAASVISWGVYYNKVVEDVLNNQWKPNTTWWGLKEGMIDLKGFNTVVPDD
VKALVEERKKGVIDGTAPIWKGPLKDNAGKEQLTKDQVADDNFLHNIKFYVDGVEGNVPG
>Mature_380_residues
MIVTRRTTLAALAATAVLALAGCGKKEAEKPAETAAPASAPAAAAAEPLKVAFVYIGPVGDAGWTYAHDAGRKAVEAKFG
DKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFGYMESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAY
LAGVVAGKMSKTGKMGVVASVPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNTD
SAAVVQTAQEKGVYAFGWDSDMSKFGEKAHLAASVISWGVYYNKVVEDVLNNQWKPNTTWWGLKEGMIDLKGFNTVVPDD
VKALVEERKKGVIDGTAPIWKGPLKDNAGKEQLTKDQVADDNFLHNIKFYVDGVEGNVPG

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 40962; Mature: 40962

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTRRTTLAALAATAVLALAGCGKKEAEKPAETAAPASAPAAAAAEPLKVAFVYIGPVG
CEEECHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCCHHCCCCEEEEEEEEECCC
DAGWTYAHDAGRKAVEAKFGDKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFGY
CCCCCCHHHHCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHH
MESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAYLAGVVAGKMSKTGKMGVVAS
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEE
VPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNTD
CCHHHHHHCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCC
SAAVVQTAQEKGVYAFGWDSDMSKFGEKAHLAASVISWGVYYNKVVEDVLNNQWKPNTTW
CHHHHHHHHHCCCEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WGLKEGMIDLKGFNTVVPDDVKALVEERKKGVIDGTAPIWKGPLKDNAGKEQLTKDQVAD
CCHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
DNFLHNIKFYVDGVEGNVPG
CCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MIVTRRTTLAALAATAVLALAGCGKKEAEKPAETAAPASAPAAAAAEPLKVAFVYIGPVG
CEEECHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCCHHCCCCEEEEEEEEECCC
DAGWTYAHDAGRKAVEAKFGDKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFGY
CCCCCCHHHHCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHH
MESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAYLAGVVAGKMSKTGKMGVVAS
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEE
VPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNTD
CCHHHHHHCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCC
SAAVVQTAQEKGVYAFGWDSDMSKFGEKAHLAASVISWGVYYNKVVEDVLNNQWKPNTTW
CHHHHHHHHHCCCEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WGLKEGMIDLKGFNTVVPDDVKALVEERKKGVIDGTAPIWKGPLKDNAGKEQLTKDQVAD
CCHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
DNFLHNIKFYVDGVEGNVPG
CCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]