| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309714
Identifier: 94309714
GI number: 94309714
Start: 846501
End: 847235
Strand: Direct
Name: 94309714
Synonym: Rmet_0769
Alternate gene names: NA
Gene position: 846501-847235 (Clockwise)
Preceding gene: 94309713
Following gene: 94309715
Centisome position: 21.55
GC content: 67.76
Gene sequence:
>735_bases ATGACGATGCAGGCGCACCGCTACGCGATCTATCTCGCGCCCGCCGAGCCATTTCGCACGTTCGGCGCGCAATGGCTCGG CCGCGATGCCGACACCGGAAATCCAACGCCGTTGCCGGCGGGCATCGCATCGCGTCCCGCCGAGTGGGTCAAGGCCCCGG CGCACTATGCGCTGCACGCCACGCTGAAGCCGCCATTCCGGCTGGCCGATGGTACCGATGCGCCCATGCTCGACGCCGCC GCCCGCGCGTTCGCACGGGAGCGCGCCGCGTTTGACGCGCCGCTGACACTGTGTGCCTTGCGCGGGTTCCTGGCTTGGTG CCTTGACGATGCGCGGGCGCAGGGCGGCAAGCGGATGCATGAGCTTGCCGACGACTGCATGCGTGCCTTCGACCATTTCC GCGCGCCGGCCACGCCGGAGGAAGTGAGTCGGCGACGGCCCGACCAACTCACGGCCGCGCAGCGCGAGATGCTCGACGCC TGGGGCTATCCGTACGCGTTCGATACGTTCACGTTCCATATCACGCTGAGCGGCATGCTAGATGCCGACAACGAGGCCGC CGCGTTCGCGCAGCTATCGGCCAGCAGCGGCAGGTTGCTTGAGGGCCCGCTGCATGTCGATGCCCTCAGTCTCTTCGTCC AACCCGAGCCCGGCGCGGATTTCATCGTCGCACGTCACTACGGCTTCGATGGCACCACTGTCGACGGCGCGGGTGTCGGC TATCTTTCGGCATGA
Upstream 100 bases:
>100_bases CCATCGTGAATGGTGAGGTGCGCCATGCGTCCGGCGCGCTGTCGATGACTGACCTGGCGGATCTCGCCGACGTAGCCGGC GCTCGCGGCAGCCTGGCGGC
Downstream 100 bases:
>100_bases CCACACGATTCCACTCCGGCTCCGCGCCTGATGGCAGCGGGCTGTTCTATGTGATGGGCCCGTCCGGCAGCGGCAAGGAT TCGCTGCTGCGGACCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTMQAHRYAIYLAPAEPFRTFGAQWLGRDADTGNPTPLPAGIASRPAEWVKAPAHYALHATLKPPFRLADGTDAPMLDAA ARAFARERAAFDAPLTLCALRGFLAWCLDDARAQGGKRMHELADDCMRAFDHFRAPATPEEVSRRRPDQLTAAQREMLDA WGYPYAFDTFTFHITLSGMLDADNEAAAFAQLSASSGRLLEGPLHVDALSLFVQPEPGADFIVARHYGFDGTTVDGAGVG YLSA
Sequences:
>Translated_244_residues MTMQAHRYAIYLAPAEPFRTFGAQWLGRDADTGNPTPLPAGIASRPAEWVKAPAHYALHATLKPPFRLADGTDAPMLDAA ARAFARERAAFDAPLTLCALRGFLAWCLDDARAQGGKRMHELADDCMRAFDHFRAPATPEEVSRRRPDQLTAAQREMLDA WGYPYAFDTFTFHITLSGMLDADNEAAAFAQLSASSGRLLEGPLHVDALSLFVQPEPGADFIVARHYGFDGTTVDGAGVG YLSA >Mature_243_residues TMQAHRYAIYLAPAEPFRTFGAQWLGRDADTGNPTPLPAGIASRPAEWVKAPAHYALHATLKPPFRLADGTDAPMLDAAA RAFARERAAFDAPLTLCALRGFLAWCLDDARAQGGKRMHELADDCMRAFDHFRAPATPEEVSRRRPDQLTAAQREMLDAW GYPYAFDTFTFHITLSGMLDADNEAAAFAQLSASSGRLLEGPLHVDALSLFVQPEPGADFIVARHYGFDGTTVDGAGVGY LSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26527; Mature: 26396
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQAHRYAIYLAPAEPFRTFGAQWLGRDADTGNPTPLPAGIASRPAEWVKAPAHYALHA CCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCCCEEEEE TLKPPFRLADGTDAPMLDAAARAFARERAAFDAPLTLCALRGFLAWCLDDARAQGGKRMH ECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH ELADDCMRAFDHFRAPATPEEVSRRRPDQLTAAQREMLDAWGYPYAFDTFTFHITLSGML HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCEEEEEEEEEEE DADNEAAAFAQLSASSGRLLEGPLHVDALSLFVQPEPGADFIVARHYGFDGTTVDGAGVG CCCCCHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCCEECCCCCC YLSA CCCC >Mature Secondary Structure TMQAHRYAIYLAPAEPFRTFGAQWLGRDADTGNPTPLPAGIASRPAEWVKAPAHYALHA CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCCCEEEEE TLKPPFRLADGTDAPMLDAAARAFARERAAFDAPLTLCALRGFLAWCLDDARAQGGKRMH ECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH ELADDCMRAFDHFRAPATPEEVSRRRPDQLTAAQREMLDAWGYPYAFDTFTFHITLSGML HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCEEEEEEEEEEE DADNEAAAFAQLSASSGRLLEGPLHVDALSLFVQPEPGADFIVARHYGFDGTTVDGAGVG CCCCCHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCCEECCCCCC YLSA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA