Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 94309713

GI number: 94309713

Start: 845281

End: 846504

Strand: Direct

Name: phnM [H]

Synonym: Rmet_0768

Alternate gene names: 94309713

Gene position: 845281-846504 (Clockwise)

Preceding gene: 94309712

Following gene: 94309714

Centisome position: 21.52

GC content: 67.24

Gene sequence:

>1224_bases
ATGCATACGATCTCTCAAGCATCATCGACCCCGCTCGCGGGGATCACCGGCCGCCGCGTGATGGGCGCCGACGGCATCGG
CCTGGCAATGTTGGGCATTCATAACGGCAGCGTGATGGCGCAGCCACCCGCAAGTGGCCCCTGCATCGACGCGGGCGACC
TGCTGGTGCTGCCGGGCATTGTCGACATTCATGGTGATGCGTTCGAGCGTTCCGTGATGCCGCGTCCCGGCGTGAGCTTC
CCATACGGAGCCGCGCTGCTCGACGTCGACCGCCAGTTGCTCGCGCACGGCATCACGACCGAGTTTCATGGCGTGACCCT
GTCGTGGGAGGGCGGCTTGCGTGGCGAGGCCTACGCGCTGCGCATGTTCGATGCGCTGGCCCAGTTGCGGCCCGTGCTGG
GCGCGGAGCACAAGGTGCATCTGCGCTTCGAGGCCTATCACCTCGCTGGCGTGGAGACGGCCTTGTCGTGGATGGCGGAT
GGCCGTGTGGCCCTGCTGGCGATCAACGATCACCTGCCGACCATGGCTCGCCGCATGAGTGACGAACGCAAGCTCGTGCA
GTACGCGGAACGCGCCGAGTGCGATACCGAGACATTCCGCAACCGTCTGCGCGCAGCCAGCCGAAATGCGCAGGAAGTGC
CTGCCGCGATGTCGTGCCTGATCGCCGCGGCGCTGGCCGCGAACCTGCCGGTTGCATCGCATGATGATCCCGACGTGGCG
ACGCGCCAGCACTATCATGCCCAGGGCTGCCGGATCGCGGAGTTCCCGCTGACGGTGGAGGCCGCGACGCTGGCACGCCA
GATCGGCGACGAGACCGTTTTCGGCGCACCCAATGTGCTGCGCGGCAAGAGCCATACGGGCGCGCCTAACGCCACGGAAA
TGGTGGCCGCCGGCCTGTGTTCGGTTCTGGCTTCCGATTACTACTATCCCGCGCTGCTGCAGGCCGCATTCAAGCTCGCG
CAGCTTGGCGTGTGCTCGCTGCCCGAGGCGTGGCACCTGGTGTCGCGTAATCCGGCACGTGCGACGGGTCTGCGCGACCG
TGGCGTGCTCGCGCCGGGAATGCGCGCCGATGCGATTCTCGTCGATGACAGCCAGCTGGGATTGCCGCGTGTCTGCGCCA
CCATCGTGAATGGTGAGGTGCGCCATGCGTCCGGCGCGCTGTCGATGACTGACCTGGCGGATCTCGCCGACGTAGCCGGC
GCTCGCGGCAGCCTGGCGGCATGA

Upstream 100 bases:

>100_bases
AGGATTGAAATGACGCATCACCCCGCGGTTGCACGCGGGGTGATGCGTACGTATTGGTCTAGACATCCGTCTGTCATCTA
CCAAAGCTAACGTATTGCCC

Downstream 100 bases:

>100_bases
CGATGCAGGCGCACCGCTACGCGATCTATCTCGCGCCCGCCGAGCCATTTCGCACGTTCGGCGCGCAATGGCTCGGCCGC
GATGCCGACACCGGAAATCC

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MHTISQASSTPLAGITGRRVMGADGIGLAMLGIHNGSVMAQPPASGPCIDAGDLLVLPGIVDIHGDAFERSVMPRPGVSF
PYGAALLDVDRQLLAHGITTEFHGVTLSWEGGLRGEAYALRMFDALAQLRPVLGAEHKVHLRFEAYHLAGVETALSWMAD
GRVALLAINDHLPTMARRMSDERKLVQYAERAECDTETFRNRLRAASRNAQEVPAAMSCLIAAALAANLPVASHDDPDVA
TRQHYHAQGCRIAEFPLTVEAATLARQIGDETVFGAPNVLRGKSHTGAPNATEMVAAGLCSVLASDYYYPALLQAAFKLA
QLGVCSLPEAWHLVSRNPARATGLRDRGVLAPGMRADAILVDDSQLGLPRVCATIVNGEVRHASGALSMTDLADLADVAG
ARGSLAA

Sequences:

>Translated_407_residues
MHTISQASSTPLAGITGRRVMGADGIGLAMLGIHNGSVMAQPPASGPCIDAGDLLVLPGIVDIHGDAFERSVMPRPGVSF
PYGAALLDVDRQLLAHGITTEFHGVTLSWEGGLRGEAYALRMFDALAQLRPVLGAEHKVHLRFEAYHLAGVETALSWMAD
GRVALLAINDHLPTMARRMSDERKLVQYAERAECDTETFRNRLRAASRNAQEVPAAMSCLIAAALAANLPVASHDDPDVA
TRQHYHAQGCRIAEFPLTVEAATLARQIGDETVFGAPNVLRGKSHTGAPNATEMVAAGLCSVLASDYYYPALLQAAFKLA
QLGVCSLPEAWHLVSRNPARATGLRDRGVLAPGMRADAILVDDSQLGLPRVCATIVNGEVRHASGALSMTDLADLADVAG
ARGSLAA
>Mature_407_residues
MHTISQASSTPLAGITGRRVMGADGIGLAMLGIHNGSVMAQPPASGPCIDAGDLLVLPGIVDIHGDAFERSVMPRPGVSF
PYGAALLDVDRQLLAHGITTEFHGVTLSWEGGLRGEAYALRMFDALAQLRPVLGAEHKVHLRFEAYHLAGVETALSWMAD
GRVALLAINDHLPTMARRMSDERKLVQYAERAECDTETFRNRLRAASRNAQEVPAAMSCLIAAALAANLPVASHDDPDVA
TRQHYHAQGCRIAEFPLTVEAATLARQIGDETVFGAPNVLRGKSHTGAPNATEMVAAGLCSVLASDYYYPALLQAAFKLA
QLGVCSLPEAWHLVSRNPARATGLRDRGVLAPGMRADAILVDDSQLGLPRVCATIVNGEVRHASGALSMTDLADLADVAG
ARGSLAA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=344, Percent_Identity=34.593023255814, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 43011; Mature: 43011

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTISQASSTPLAGITGRRVMGADGIGLAMLGIHNGSVMAQPPASGPCIDAGDLLVLPGI
CCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCEEEECCE
VDIHGDAFERSVMPRPGVSFPYGAALLDVDRQLLAHGITTEFHGVTLSWEGGLRGEAYAL
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCEEEEECCCCCCHHHHH
RMFDALAQLRPVLGAEHKVHLRFEAYHLAGVETALSWMADGRVALLAINDHLPTMARRMS
HHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
DERKLVQYAERAECDTETFRNRLRAASRNAQEVPAAMSCLIAAALAANLPVASHDDPDVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
TRQHYHAQGCRIAEFPLTVEAATLARQIGDETVFGAPNVLRGKSHTGAPNATEMVAAGLC
HHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SVLASDYYYPALLQAAFKLAQLGVCSLPEAWHLVSRNPARATGLRDRGVLAPGMRADAIL
HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEE
VDDSQLGLPRVCATIVNGEVRHASGALSMTDLADLADVAGARGSLAA
ECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHTISQASSTPLAGITGRRVMGADGIGLAMLGIHNGSVMAQPPASGPCIDAGDLLVLPGI
CCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCEEEECCE
VDIHGDAFERSVMPRPGVSFPYGAALLDVDRQLLAHGITTEFHGVTLSWEGGLRGEAYAL
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCEEEEECCCCCCHHHHH
RMFDALAQLRPVLGAEHKVHLRFEAYHLAGVETALSWMADGRVALLAINDHLPTMARRMS
HHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
DERKLVQYAERAECDTETFRNRLRAASRNAQEVPAAMSCLIAAALAANLPVASHDDPDVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
TRQHYHAQGCRIAEFPLTVEAATLARQIGDETVFGAPNVLRGKSHTGAPNATEMVAAGLC
HHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SVLASDYYYPALLQAAFKLAQLGVCSLPEAWHLVSRNPARATGLRDRGVLAPGMRADAIL
HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEE
VDDSQLGLPRVCATIVNGEVRHASGALSMTDLADLADVAGARGSLAA
ECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]