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The map label for this gene is pilA [H]

Identifier: 94309642

GI number: 94309642

Start: 769207

End: 769671

Strand: Reverse

Name: pilA [H]

Synonym: Rmet_0697

Alternate gene names: 94309642

Gene position: 769671-769207 (Counterclockwise)

Preceding gene: 94309643

Following gene: 94309641

Centisome position: 19.59

GC content: 55.7

Gene sequence:

>465_bases
ATGAAAAAAGCACGGATGGGAATCCGACGGGTACAGAAGGGCTTTACGCTGATCGAACTGATGATCGTGGTCGCGATCAT
CGGTATCTTGGCGGCTATCGCTATTCCGGCGTATCAGGATTATGTGGCGAAGTCGAAGGCAGCTTCCGCCTACGCCGATA
TCGCTGCCGGTAAGACGGCGTATGAACTGATGGTAGTGAACCCGGATAACGGTACGCCTACCTTTACGCCTGCTGGAATT
GGTCTGCAGATCGCGACTGGCAACTGCTCCGCGATTGCGGTGGCTGCTCCGGACAATACGGGTGCCGCGACAAATGCAAT
TCAGTGCACGATCGCCGCCCCGGGTCGTCTTGGAACTGCACCGGTTTCTATCCAGTTCAATCGTTTGGCAACCGGTCTGT
ACACTTGCACTACGACGGGCATCACGAATACGAGCTTCATTCCGACGGGTTGCGTCGCAGGTTGA

Upstream 100 bases:

>100_bases
ATTTCCGGGCTGCGAGGCTGTTTTTGCCCCTGGCACGCGAGTTGCTCTTTGTTGACCCAGCAGCACTCTGGCTGCCTAAC
AATTCATACTGGGGTCACTC

Downstream 100 bases:

>100_bases
TCTTTAGTCATCGCTAAAGAACGAGGCGCCTGCGGGCGCCTTCTTTCATTTGGAGTATCTGCTGTGCCAATGCCAACTAT
CGCCGAACTCGCCGCAGCGT

Product: Type IV pilus structural subunit PilA

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKKARMGIRRVQKGFTLIELMIVVAIIGILAAIAIPAYQDYVAKSKAASAYADIAAGKTAYELMVVNPDNGTPTFTPAGI
GLQIATGNCSAIAVAAPDNTGAATNAIQCTIAAPGRLGTAPVSIQFNRLATGLYTCTTTGITNTSFIPTGCVAG

Sequences:

>Translated_154_residues
MKKARMGIRRVQKGFTLIELMIVVAIIGILAAIAIPAYQDYVAKSKAASAYADIAAGKTAYELMVVNPDNGTPTFTPAGI
GLQIATGNCSAIAVAAPDNTGAATNAIQCTIAAPGRLGTAPVSIQFNRLATGLYTCTTTGITNTSFIPTGCVAG
>Mature_154_residues
MKKARMGIRRVQKGFTLIELMIVVAIIGILAAIAIPAYQDYVAKSKAASAYADIAAGKTAYELMVVNPDNGTPTFTPAGI
GLQIATGNCSAIAVAAPDNTGAATNAIQCTIAAPGRLGTAPVSIQFNRLATGLYTCTTTGITNTSFIPTGCVAG

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 15667; Mature: 15667

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKARMGIRRVQKGFTLIELMIVVAIIGILAAIAIPAYQDYVAKSKAASAYADIAAGKTA
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE
YELMVVNPDNGTPTFTPAGIGLQIATGNCSAIAVAAPDNTGAATNAIQCTIAAPGRLGTA
EEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC
PVSIQFNRLATGLYTCTTTGITNTSFIPTGCVAG
EEEEEEHHHHCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKARMGIRRVQKGFTLIELMIVVAIIGILAAIAIPAYQDYVAKSKAASAYADIAAGKTA
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE
YELMVVNPDNGTPTFTPAGIGLQIATGNCSAIAVAAPDNTGAATNAIQCTIAAPGRLGTA
EEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC
PVSIQFNRLATGLYTCTTTGITNTSFIPTGCVAG
EEEEEEHHHHCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]