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The map label for this gene is lemA [H]

Identifier: 94309610

GI number: 94309610

Start: 732255

End: 732857

Strand: Reverse

Name: lemA [H]

Synonym: Rmet_0665

Alternate gene names: 94309610

Gene position: 732857-732255 (Counterclockwise)

Preceding gene: 94309612

Following gene: 94309609

Centisome position: 18.66

GC content: 64.18

Gene sequence:

>603_bases
ATGCGCGCTGCCACTTCCACCGCCCTGTTCCGCTGGCTGGCGATCGCCATGCTGGCAAGCCTGCTCTCCGCCTGCGGCTA
CAACGACTTCCAGGCCAAGGACGAAGCCGTCAAGGCGGCATGGGGCGAGGTCATCAACCAGTACCAGCGCCGCGCCGATC
TGATTCCGAACCTGGTCGCCACGGTCAAAGGCTACGCCACACACGAACGCGAGACGCTCGAGGCCGTCACCAAGGCACGT
GCCGAGGCCACCAGCATCAAGGTCACGCCCGAGACCCTCAACGATCCCGAGGCTTTCGCGCGGTTCCAGCAGGCCCAGGG
GCAACTGACCAGCGCGCTGTCGCGCCTGCTGGCCGTTTCCGAGAACTACCCGCAACTGAAGGCCGACGCCTCGTTCCGCG
ACCTGCAATCGCAACTCGAAGGCACCGAGAACCGTATCACGGTGGCACGCCAGCGCTACATCGCAGCCGTGCAGGATTAC
AACGTGCTGGCACGCAGCTTCCCGACCAACCTCACGGCGATGATCTTCAAGTACCCGGTCAAGCCGTCGTTCACCGTGGA
GAACGAGAAGTCCATCTCCACGCCTCCCGCCGTGAAGTTCTGA

Upstream 100 bases:

>100_bases
TCGCCGGAGGGTGGCGCCTTGACAGCTTTTGACGATGTACGGCAACCACCCTGCGCTACACTTCAACGTTATCGACCCCT
GACATCTGCCGGAGCCCTAG

Downstream 100 bases:

>100_bases
TACCGCGACCATCATGATGCGCAAGGCCGTCGTCTTCTGGTTCCTGGCGCTGATGCTGGCGCTGCCGGCATGGGCGGCGG
ACGGCTTCGTCGCCGTCCCC

Product: LemA like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRAATSTALFRWLAIAMLASLLSACGYNDFQAKDEAVKAAWGEVINQYQRRADLIPNLVATVKGYATHERETLEAVTKAR
AEATSIKVTPETLNDPEAFARFQQAQGQLTSALSRLLAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIAAVQDY
NVLARSFPTNLTAMIFKYPVKPSFTVENEKSISTPPAVKF

Sequences:

>Translated_200_residues
MRAATSTALFRWLAIAMLASLLSACGYNDFQAKDEAVKAAWGEVINQYQRRADLIPNLVATVKGYATHERETLEAVTKAR
AEATSIKVTPETLNDPEAFARFQQAQGQLTSALSRLLAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIAAVQDY
NVLARSFPTNLTAMIFKYPVKPSFTVENEKSISTPPAVKF
>Mature_200_residues
MRAATSTALFRWLAIAMLASLLSACGYNDFQAKDEAVKAAWGEVINQYQRRADLIPNLVATVKGYATHERETLEAVTKAR
AEATSIKVTPETLNDPEAFARFQQAQGQLTSALSRLLAVSENYPQLKADASFRDLQSQLEGTENRITVARQRYIAAVQDY
NVLARSFPTNLTAMIFKYPVKPSFTVENEKSISTPPAVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22195; Mature: 22195

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAATSTALFRWLAIAMLASLLSACGYNDFQAKDEAVKAAWGEVINQYQRRADLIPNLVA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKGYATHERETLEAVTKARAEATSIKVTPETLNDPEAFARFQQAQGQLTSALSRLLAVS
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ENYPQLKADASFRDLQSQLEGTENRITVARQRYIAAVQDYNVLARSFPTNLTAMIFKYPV
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
KPSFTVENEKSISTPPAVKF
CCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRAATSTALFRWLAIAMLASLLSACGYNDFQAKDEAVKAAWGEVINQYQRRADLIPNLVA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKGYATHERETLEAVTKARAEATSIKVTPETLNDPEAFARFQQAQGQLTSALSRLLAVS
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ENYPQLKADASFRDLQSQLEGTENRITVARQRYIAAVQDYNVLARSFPTNLTAMIFKYPV
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
KPSFTVENEKSISTPPAVKF
CCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]