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The map label for this gene is 94309579

Identifier: 94309579

GI number: 94309579

Start: 699369

End: 700940

Strand: Direct

Name: 94309579

Synonym: Rmet_0634

Alternate gene names: NA

Gene position: 699369-700940 (Clockwise)

Preceding gene: 94309578

Following gene: 94309580

Centisome position: 17.8

GC content: 66.41

Gene sequence:

>1572_bases
ATGTTCAATAACCTGTTCAACGCGCTGTTCGGCGCGCGCGCCCCCGCCGATCTGGCCCGCTCCACGCTGGCCCGGTGGGA
GCCATTGTTGCAGCCGATCCGTCAGGAGGCACTGGTCGGAGACGACCCGGGTTACGAGGATGACTTCCTCGCCATTAAGG
AGGAAGTGGCCAAGCGCTCGGATATCAATGATGCCTTGATCGTGGAGTCGGCCGAGCGCTTGCTCAAGACCAGCGCCAAG
GATGTCCGCCTGGCGGTTTACTACATCTATGGCCGTATGAGACGCGACGGTGCGGAAGGGATCGCCGACGGCTTCGAACT
ACTGGCGGCACTGATCGATCGCTTCGGCCCCAAGTTGCTACCAGCCCGCGCGGAAAGCCAAAAGGCCGCACTCGAATGGC
TGGCCGGTGCCACCTTCACCGATCGGCTTGACCGGGTGCAGGGATTCGCCGGTGGCCCGCTGGAGCGCACGCTGTCGGCG
ATGGCGCTGATTCTGGAGGGCATCGGAAAGTGGCCCGAGCCGGCCCGTCCGGCGCTCGAAGCGCTGTTTCGCTGGTTCGA
GGAACGGGTCGAAACGCCGTCGTCAGCGGAAGGTAAGGGGAACATCGCTGCTCCGAAAGCCCTTGCCACGGCGTCGCTCT
TGGGCGGAGAGGTGACCTCCACGCGCGACCTGCTGGATCGGGCGCGCCAGATGGCATTGTTCCTGCGCCAGCAGCCTGAC
GGCTATCTCGCCGCCTATCGGCTGATGCGCTGCGTGCGTTGGGACACCCTTACCGAGGCGCCGCCGCATGAAGCCAGCGG
CAGGACCCGCCTGGTAGCCCCGCGCGCCGAACTACGCGCGCAAATCAAGCGGCTGATGCTGCAAAAACAGTGGCCGGAGT
TGCTCGACCGAATCGAACCGGCCTTCGCCGAGGGCGCCAATCATTTCTGGCTGGACCTGCAGTACTACGCGTTCATGGCG
CAGGACCATGCCGGTGGCGCCTACGCGCGCGTGCGCGACCTGTTGGCCACCGACTGCGCCCTGATGCTGGAACGTCTGCC
GGGCCTGGACCAGCTTGCCTTCTCGGACGGCACGCCGTTTGCGGACGACGCCACGCTCGAATGGATTGCGCGCTACGCCA
CCGTGCGGGATATCGAGCGCGGCGAATCCGTGTCGCCGGTTGCGGTTGCCTCCGTGAGTGCCGACTTGGCGGAAACGGAA
GCGCAGGCGATCGACCTCGCCGCACAGCAGAGTCTGGAGGCTGCCTTTGCCTGGCTGCAGGGGTTGCCGGCACCGGCTGG
CGAGCGCGATCGCTTCGTGCGGCAACTGGTGATGGCGCGTGTGGCCGAGCGCGTCGACCGGGCCGATACCGCCTTGCACT
TGCTGTCCGCGCTCGAAACCGGCACCCAGCGCTATCAACTGGCCAACTGGGAGCCCTCCCTCGCGTTCGAGGTCAAGCAG
CATCTGCTGCGCCTGCTGAGGGTGCGCCTCACCCGCAAGGACGCGGACAAGGCAGCCCTGAGCGGGCGCATCGAGGCGCT
GGTCGGCGACCTGACCGCCATCGATCCTGCCCGCGCCGTGGCCATCACCTAA

Upstream 100 bases:

>100_bases
TCCGCAGGGGCACCTGACGCCGGCCATGGAAGCTTCGGCCTATGCCTCGACCTTTTGACCGTGCGAGTCAACGCGCACGT
AAAGCACGTGAAGGAAGCGC

Downstream 100 bases:

>100_bases
AGCGTATCCATCCTGTATTGCATGAACCATCCCGCCCAAGACAACGAGATCCTGCGTTACTACGAAGCCGAGATGCGCTA
CCTGCGCGAAGCCGGCAAGG

Product: ImpA, N-terminal

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; ImpA-Like; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein VasJ; ImpA N-Terminal; Protein ImpA; Conserved Protein; Type VI Secretion-Associated Protein Family; ImpA-Like Protein

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MFNNLFNALFGARAPADLARSTLARWEPLLQPIRQEALVGDDPGYEDDFLAIKEEVAKRSDINDALIVESAERLLKTSAK
DVRLAVYYIYGRMRRDGAEGIADGFELLAALIDRFGPKLLPARAESQKAALEWLAGATFTDRLDRVQGFAGGPLERTLSA
MALILEGIGKWPEPARPALEALFRWFEERVETPSSAEGKGNIAAPKALATASLLGGEVTSTRDLLDRARQMALFLRQQPD
GYLAAYRLMRCVRWDTLTEAPPHEASGRTRLVAPRAELRAQIKRLMLQKQWPELLDRIEPAFAEGANHFWLDLQYYAFMA
QDHAGGAYARVRDLLATDCALMLERLPGLDQLAFSDGTPFADDATLEWIARYATVRDIERGESVSPVAVASVSADLAETE
AQAIDLAAQQSLEAAFAWLQGLPAPAGERDRFVRQLVMARVAERVDRADTALHLLSALETGTQRYQLANWEPSLAFEVKQ
HLLRLLRVRLTRKDADKAALSGRIEALVGDLTAIDPARAVAIT

Sequences:

>Translated_523_residues
MFNNLFNALFGARAPADLARSTLARWEPLLQPIRQEALVGDDPGYEDDFLAIKEEVAKRSDINDALIVESAERLLKTSAK
DVRLAVYYIYGRMRRDGAEGIADGFELLAALIDRFGPKLLPARAESQKAALEWLAGATFTDRLDRVQGFAGGPLERTLSA
MALILEGIGKWPEPARPALEALFRWFEERVETPSSAEGKGNIAAPKALATASLLGGEVTSTRDLLDRARQMALFLRQQPD
GYLAAYRLMRCVRWDTLTEAPPHEASGRTRLVAPRAELRAQIKRLMLQKQWPELLDRIEPAFAEGANHFWLDLQYYAFMA
QDHAGGAYARVRDLLATDCALMLERLPGLDQLAFSDGTPFADDATLEWIARYATVRDIERGESVSPVAVASVSADLAETE
AQAIDLAAQQSLEAAFAWLQGLPAPAGERDRFVRQLVMARVAERVDRADTALHLLSALETGTQRYQLANWEPSLAFEVKQ
HLLRLLRVRLTRKDADKAALSGRIEALVGDLTAIDPARAVAIT
>Mature_523_residues
MFNNLFNALFGARAPADLARSTLARWEPLLQPIRQEALVGDDPGYEDDFLAIKEEVAKRSDINDALIVESAERLLKTSAK
DVRLAVYYIYGRMRRDGAEGIADGFELLAALIDRFGPKLLPARAESQKAALEWLAGATFTDRLDRVQGFAGGPLERTLSA
MALILEGIGKWPEPARPALEALFRWFEERVETPSSAEGKGNIAAPKALATASLLGGEVTSTRDLLDRARQMALFLRQQPD
GYLAAYRLMRCVRWDTLTEAPPHEASGRTRLVAPRAELRAQIKRLMLQKQWPELLDRIEPAFAEGANHFWLDLQYYAFMA
QDHAGGAYARVRDLLATDCALMLERLPGLDQLAFSDGTPFADDATLEWIARYATVRDIERGESVSPVAVASVSADLAETE
AQAIDLAAQQSLEAAFAWLQGLPAPAGERDRFVRQLVMARVAERVDRADTALHLLSALETGTQRYQLANWEPSLAFEVKQ
HLLRLLRVRLTRKDADKAALSGRIEALVGDLTAIDPARAVAIT

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57828; Mature: 57828

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNLFNALFGARAPADLARSTLARWEPLLQPIRQEALVGDDPGYEDDFLAIKEEVAKRS
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
DINDALIVESAERLLKTSAKDVRLAVYYIYGRMRRDGAEGIADGFELLAALIDRFGPKLL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PARAESQKAALEWLAGATFTDRLDRVQGFAGGPLERTLSAMALILEGIGKWPEPARPALE
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
ALFRWFEERVETPSSAEGKGNIAAPKALATASLLGGEVTSTRDLLDRARQMALFLRQQPD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GYLAAYRLMRCVRWDTLTEAPPHEASGRTRLVAPRAELRAQIKRLMLQKQWPELLDRIEP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCH
AFAEGANHFWLDLQYYAFMAQDHAGGAYARVRDLLATDCALMLERLPGLDQLAFSDGTPF
HHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
ADDATLEWIARYATVRDIERGESVSPVAVASVSADLAETEAQAIDLAAQQSLEAAFAWLQ
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPAPAGERDRFVRQLVMARVAERVDRADTALHLLSALETGTQRYQLANWEPSLAFEVKQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
HLLRLLRVRLTRKDADKAALSGRIEALVGDLTAIDPARAVAIT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEECC
>Mature Secondary Structure
MFNNLFNALFGARAPADLARSTLARWEPLLQPIRQEALVGDDPGYEDDFLAIKEEVAKRS
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
DINDALIVESAERLLKTSAKDVRLAVYYIYGRMRRDGAEGIADGFELLAALIDRFGPKLL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PARAESQKAALEWLAGATFTDRLDRVQGFAGGPLERTLSAMALILEGIGKWPEPARPALE
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
ALFRWFEERVETPSSAEGKGNIAAPKALATASLLGGEVTSTRDLLDRARQMALFLRQQPD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GYLAAYRLMRCVRWDTLTEAPPHEASGRTRLVAPRAELRAQIKRLMLQKQWPELLDRIEP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCH
AFAEGANHFWLDLQYYAFMAQDHAGGAYARVRDLLATDCALMLERLPGLDQLAFSDGTPF
HHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
ADDATLEWIARYATVRDIERGESVSPVAVASVSADLAETEAQAIDLAAQQSLEAAFAWLQ
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPAPAGERDRFVRQLVMARVAERVDRADTALHLLSALETGTQRYQLANWEPSLAFEVKQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
HLLRLLRVRLTRKDADKAALSGRIEALVGDLTAIDPARAVAIT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA