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The map label for this gene is 94309575

Identifier: 94309575

GI number: 94309575

Start: 692915

End: 694213

Strand: Direct

Name: 94309575

Synonym: Rmet_0630

Alternate gene names: NA

Gene position: 692915-694213 (Clockwise)

Preceding gene: 94309574

Following gene: 94309576

Centisome position: 17.64

GC content: 61.82

Gene sequence:

>1299_bases
ATGCGCATCGCACTGGCCGTACTGCTGGCGGCCTTCACGCTCACCGCGTGTTCCAAGGAAACCTCTATGCCGACCGTCCC
CGATCTGGCCACCGTTCGCGCCAATCTGGCCTTTACCTGCGTCCGCGAGGCGGACCATCTGCCGCCGCTTGATCCGGAGG
CCGATGCGTTGTTCAAGTATGCCCGCCATCTGCAGAAGCGCGAGGGACCCAAGGACTTCGATGACGTGGCACGTTACTAC
CGGATCGCGGCGGCTCATGGGCATTACAAGGCCAACAGCAACCTGCAGAAGCTGGTCTCGGAAGGCATGGCGTCATCGCC
GCTCCCGCAGCGGGAGAGCGTCGCGTTGGCCAGCCGGTTGATCGATGCGGGCGTGCCGTCGGGCTACTACGACATCGGCT
ACTACTTGAACCTGGGATATGGACTGAAGCAGGACAAGGAGATGGCGCTGCGCTACTTCCGCAAGGCTGCCGATCTGGGC
AATGCGGATGCGCAGTTCTACGTCGGGAAGCTGCTAGCTCCCCGGGATAAGGCGCCGGAAATCGCCAGGCAAATGCGACA
GTGTGCGACCGATCAAGGACATGGAGGTGCGGCTCATACCTTAGGTATTGATTTGCAGATTGATGGCGTCTATTCCGACG
CGGTGAAGGCATTCCAAGAGGGCGTGATAGCGGGTGATTCAATGTCTGCGTCATTTCTGGAACATGGCTTCAAAGCCCCC
CCTCCCTCGGACGGATTGAATTACCTCGCCCTTCCAAACGATCCTGAACGGTCGCGGCGCTACAAGCTGATCTGGCGGTT
CCTGATACGCAACGACGGCCGTAACCCCAAAGTGCCGGACATCGATCAGATCGTCCCACTGCCCCCTGCGAAGCTGCCGC
CCTGGGACGGCACCTTCCAGTGGCAGAAGGAACAGGATGCCGCGGTCCCGCCCGACAAGCCATCGGACGAACTCATCAAC
CGCCTGAGCAAGGCCAGGAATCTTGATCCGGCCACCGGTCTGCCGCTGACCACTTCAGCAAAGACCGCGCAGACGGCGAC
CTCGGCGCCGGAGCAGAAGTCGCTGCCGCTCGGTACTGAGGCGAGTACGGGCGAGCAGTGTCCGCAACGCGGACTGTGGT
GCGTCAGAGGCGCCGCCAGCATCTCGGGCTCCAGGCGCGAGTTCGAGAAGGGGGACATTCTGCCTCCACTGACGGCCTAC
GATCCGCGCCCCTTTGCGTGGATGGATTCCCTGCTGGGAATGCGTGAGCAATCCGCTGACGTGACCTGGGAACTGATTGC
CTACAGCAATCAGGCCTGA

Upstream 100 bases:

>100_bases
AGAGAACGCGAGACGCAAGAAGACCGGGAAAGAAGCGCCCCATGCCTCTCTGATCGAATTCCACCGCGACGACCCGAAGC
GGACCTACAAGGACTGACCG

Downstream 100 bases:

>100_bases
CGAACACTGCAATGCCAGATGGCATGCCGCTCGGTGTGCTGGATCAGCCCATGCCTGCGCCGTGGGCCTTGATTTCTACG
ACTTAGGAGAAATGACTTGC

Product: putative sel1-like repeat; harboring protein

Products: NA

Alternate protein names: Sel1 Domain-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat Containing SEL1 Subfamily; TPR Repeat-Containing Protein; Sel1-Like Lipoprotein; Sel1-Like Repeat

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADALFKYARHLQKREGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASRLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGKLLAPRDKAPEIARQMRQCATDQGHGGAAHTLGIDLQIDGVYSDAVKAFQEGVIAGDSMSASFLEHGFKAP
PPSDGLNYLALPNDPERSRRYKLIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPPDKPSDELIN
RLSKARNLDPATGLPLTTSAKTAQTATSAPEQKSLPLGTEASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYSNQA

Sequences:

>Translated_432_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADALFKYARHLQKREGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASRLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGKLLAPRDKAPEIARQMRQCATDQGHGGAAHTLGIDLQIDGVYSDAVKAFQEGVIAGDSMSASFLEHGFKAP
PPSDGLNYLALPNDPERSRRYKLIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPPDKPSDELIN
RLSKARNLDPATGLPLTTSAKTAQTATSAPEQKSLPLGTEASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYSNQA
>Mature_432_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADALFKYARHLQKREGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASRLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGKLLAPRDKAPEIARQMRQCATDQGHGGAAHTLGIDLQIDGVYSDAVKAFQEGVIAGDSMSASFLEHGFKAP
PPSDGLNYLALPNDPERSRRYKLIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPPDKPSDELIN
RLSKARNLDPATGLPLTTSAKTAQTATSAPEQKSLPLGTEASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYSNQA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47398; Mature: 47398

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADALFKY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHH
ARHLQKREGPKDFDDVARYYRIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASRL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
IDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLGNADAQFYVGKLLAPRDKAPE
HHHCCCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH
IARQMRQCATDQGHGGAAHTLGIDLQIDGVYSDAVKAFQEGVIAGDSMSASFLEHGFKAP
HHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
PPSDGLNYLALPNDPERSRRYKLIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQ
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
WQKEQDAAVPPDKPSDELINRLSKARNLDPATGLPLTTSAKTAQTATSAPEQKSLPLGTE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
ASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAYDPRPFAWMDSLLGMREQSAD
CCCCHHHHHCCCEEECCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCC
VTWELIAYSNQA
CEEEEEEECCCC
>Mature Secondary Structure
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADALFKY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHH
ARHLQKREGPKDFDDVARYYRIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASRL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
IDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLGNADAQFYVGKLLAPRDKAPE
HHHCCCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH
IARQMRQCATDQGHGGAAHTLGIDLQIDGVYSDAVKAFQEGVIAGDSMSASFLEHGFKAP
HHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
PPSDGLNYLALPNDPERSRRYKLIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQ
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
WQKEQDAAVPPDKPSDELINRLSKARNLDPATGLPLTTSAKTAQTATSAPEQKSLPLGTE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
ASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAYDPRPFAWMDSLLGMREQSAD
CCCCHHHHHCCCEEECCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCC
VTWELIAYSNQA
CEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA