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The map label for this gene is 94309573

Identifier: 94309573

GI number: 94309573

Start: 691407

End: 692714

Strand: Direct

Name: 94309573

Synonym: Rmet_0628

Alternate gene names: NA

Gene position: 691407-692714 (Clockwise)

Preceding gene: 94309572

Following gene: 94309574

Centisome position: 17.6

GC content: 61.7

Gene sequence:

>1308_bases
ATGCGCATCGCACTGGCCGTACTGCTGGCGGCCTTCACGCTCACCGCGTGTTCCAAGGAAACCTCTATGCCGACCGTCCC
CGATCTGGCCACCGTTCGCGCCAATCTGGCCTTTACCTGCGTCCGCGAGGCGGACCATCTGCCGCCGCTTGATCCGGAGG
CCGATGTGTTGTTCAAGTACGCCCGCTATCTGCAGAAGCTTGAGGGACCCAAGGACTTCGATGACGTAGCGCGCTACTAC
CGGATCGCGGCGGCTCATGGGCATTACAAGGCCAACAGCAACCTGCAGAAACTGGTCTCGGAAGGCATGGCGTCATCGCC
GCTCCCACAGAGGGAGAGCGTCGCGCTGGCCAGTCAGTTGATCGACGCGGGCGTGCCGTCGGGCTACTACGACATCGGCT
ATTACCTGAACCTGGGATATGGACTCAAACAGGACAAGGAGATGGCGCTGCGTTATTTCCGCAAAGCTGCCGATCTGGGC
AACGCCGACGCCCAGTTTTACGTTGGCGATCTGCTGGCGCCCCGGGATAATGCGCCGGAAATCGCCAGGCAGATGCGGCA
GTGCGCGACGGAGCAGGGACACGGCGAGGCAGCTGGTACGCTGGGCGTCAATCTAAGTGGTAAGAAGCATTTCCCCGAAG
CGGTGGCTGCATTTCAGAAGGGCGTGATAGCGGGTGATTCAATGTCTGCGTCATTTCTGGAAGATGGCTTTAAAGCCCCC
CCTCCCTCGGACGGATTGAATTACCTCGCCCTTCCAAACGACCCCGAACGCTCGCGGCGCTACGAGTTGATCTGGCGGTT
CCTGATACGCAACGACGGCCGTAACCCCAAAGTGCCGGACATTGACCAGATCGTGCCACTGCCGCCGGCGAAGCTGCCGC
CCTGGGATGGCACCTTCCAGTGGCAGAAGGAACAGGATGCCGCGGTCCCACTGGAAAAGCCATCGGTCGAACTCATCAAC
CGCCTGAGCGAGGCCAAGAACCTCGACCCGGCCACCGGCCTGCCGCTGACCACTTCAGCAAAGACCGCGCAGACGACGAC
CTCTGCGGCGGAGCAGAAGGCGCTGCCACTCGGTACTAAGGCGAGCACGGGCGAGCAGTGTCCGCAACGTGGACTGTGGT
GCGTCAGAGGTGCCGCAAGCATCTCGGGCTCCAGGCGCGAGTTCGAGAAGGGGGACATTCTGCCTCCATTGACGGCCTAC
GATCCGCGCCCCTTTGCGTGGATGGATTCCCTGCTGGGAATGCGTGAGCAATCCGCTGACGTGACCTGGGAACTCATTGC
CTACAGAGCCACGAGAACGACGTGGTGA

Upstream 100 bases:

>100_bases
CAGACGGAATGCAGATAATCGGAACAATGGGAACGCCCCAGAATCGTCGCTGATTGAGTTCAGCCGCAAAGATCCGAAGC
GGACCTACAAGGACTGACCG

Downstream 100 bases:

>100_bases
CGCGGCCATTGCGCCGGAAACTTTGGCATGACCATACGAAGGGGATGGGCGATCACGATGATCCGGCGAAGGCATTTATG
CAGTGGGGGAAGATCATCGG

Product: putative sel1-like repeat; harboring protein

Products: NA

Alternate protein names: Sel1 Domain-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat Containing SEL1 Subfamily; TPR Repeat-Containing Protein; Sel1-Like Lipoprotein; Sel1-Like Repeat

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADVLFKYARYLQKLEGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASQLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGDLLAPRDNAPEIARQMRQCATEQGHGEAAGTLGVNLSGKKHFPEAVAAFQKGVIAGDSMSASFLEDGFKAP
PPSDGLNYLALPNDPERSRRYELIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPLEKPSVELIN
RLSEAKNLDPATGLPLTTSAKTAQTTTSAAEQKALPLGTKASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYRATRTTW

Sequences:

>Translated_435_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADVLFKYARYLQKLEGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASQLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGDLLAPRDNAPEIARQMRQCATEQGHGEAAGTLGVNLSGKKHFPEAVAAFQKGVIAGDSMSASFLEDGFKAP
PPSDGLNYLALPNDPERSRRYELIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPLEKPSVELIN
RLSEAKNLDPATGLPLTTSAKTAQTTTSAAEQKALPLGTKASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYRATRTTW
>Mature_435_residues
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADVLFKYARYLQKLEGPKDFDDVARYY
RIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASQLIDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLG
NADAQFYVGDLLAPRDNAPEIARQMRQCATEQGHGEAAGTLGVNLSGKKHFPEAVAAFQKGVIAGDSMSASFLEDGFKAP
PPSDGLNYLALPNDPERSRRYELIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQWQKEQDAAVPLEKPSVELIN
RLSEAKNLDPATGLPLTTSAKTAQTTTSAAEQKALPLGTKASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAY
DPRPFAWMDSLLGMREQSADVTWELIAYRATRTTW

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47746; Mature: 47746

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADVLFKY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHH
ARYLQKLEGPKDFDDVARYYRIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASQL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
IDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLGNADAQFYVGDLLAPRDNAPE
HHCCCCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCHH
IARQMRQCATEQGHGEAAGTLGVNLSGKKHFPEAVAAFQKGVIAGDSMSASFLEDGFKAP
HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
PPSDGLNYLALPNDPERSRRYELIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQ
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
WQKEQDAAVPLEKPSVELINRLSEAKNLDPATGLPLTTSAKTAQTTTSAAEQKALPLGTK
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAYDPRPFAWMDSLLGMREQSAD
CCCCHHHHHCCCEEECCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCC
VTWELIAYRATRTTW
CEEEHEEEHHHCCCC
>Mature Secondary Structure
MRIALAVLLAAFTLTACSKETSMPTVPDLATVRANLAFTCVREADHLPPLDPEADVLFKY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHH
ARYLQKLEGPKDFDDVARYYRIAAAHGHYKANSNLQKLVSEGMASSPLPQRESVALASQL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
IDAGVPSGYYDIGYYLNLGYGLKQDKEMALRYFRKAADLGNADAQFYVGDLLAPRDNAPE
HHCCCCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCHH
IARQMRQCATEQGHGEAAGTLGVNLSGKKHFPEAVAAFQKGVIAGDSMSASFLEDGFKAP
HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
PPSDGLNYLALPNDPERSRRYELIWRFLIRNDGRNPKVPDIDQIVPLPPAKLPPWDGTFQ
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
WQKEQDAAVPLEKPSVELINRLSEAKNLDPATGLPLTTSAKTAQTTTSAAEQKALPLGTK
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ASTGEQCPQRGLWCVRGAASISGSRREFEKGDILPPLTAYDPRPFAWMDSLLGMREQSAD
CCCCHHHHHCCCEEECCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCC
VTWELIAYRATRTTW
CEEEHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA